Ictalurus punctatus (channel catfish): 108255997
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Entry
108255997 CDS
T04658
Name
(RefSeq) speckle-type POZ protein
KO
K10523
speckle-type POZ protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108255997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108255997
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108255997
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Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
108255997
NCBI-ProteinID:
XP_017307930
Ensembl:
ENSIPUG00000024416
UniProt:
W5UFQ3
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Position
2:31010583..31133874
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AA seq
374 aa
AA seq
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MSRVPSPPPPAEMTSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NAAEILILADLHSADQLKTQAVDFINYHASDVMETSGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtccagggtcccgagtccgccccctcccgctgagatgaccagcggccctgtggccgag
agctggtgttacacacagatcaaagtagtgaagttctcctacatgtggaccatcaacaac
ttcagcttctgtcgggaggagatgggcgaggtcatcaaaagctccaccttctcctcggga
gcaaacgacaaactcaaatggtgtttgcgggtgaatccgaaagggttggatgaggagagt
aaggattacttgtccctctatttgctcctggtaagctgtcccaagagcgaagtgcgtgca
aagtttaagttctccattctcaacgctaagggcgaggaaaccaaagcaatggagagtcag
cgggcctacagattcgtgcaaggcaaagactggggcttcaagaagtttataaggcgggac
ttcctactggatgaggccaatgggctgctaccagacgacaaactgacactcttctgtgag
gtgagcgtggtgcaggactcggtgaacatttctggacagaacacgatgaacatggtgaag
gttccggactgcagactggctgacgagctgggcggcttgtgggaacattcgcgcttcaca
gactgctcactctgcgtcgctggccaggagttccaggcacacaaagccatcctagcagct
cgttctcctgttttcagcgccatgttcgagcatgaaatggaggagagcaaaaagaaccga
gtggagattaacgacgtggagcccgaagtgttcaaggagatgatgtgttttatctacacc
ggaaaagcacctaacctggacaagatggctgacgacctgcttgctgctgctgacaagtat
gctctggagcgcttgaaggtgatgtgtgaggacgctctgtgtacgagtctgtccgtggag
aacgccgccgagatcctgattctggctgacctgcacagcgccgatcagctcaaaacccaa
gccgtcgactttatcaactaccatgcgtcagatgtgatggagacatccggttggaagtcc
atggtggcgtctcaccctcacctggttgcggaggcgtaccgttccctggcgtcggcccag
tgcccctttctgggcccaccccgaaagcgtctcaaacagtcatag
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