Ictalurus punctatus (channel catfish): 108256048
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Entry
108256048 CDS
T04658
Symbol
lrrc8ab
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108256048 (lrrc8ab)
Ion channels [BR:
ipu04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
108256048 (lrrc8ab)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_At5g56370
LRR_LRWD1
Sp-CxC
LRR_6
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
108256048
NCBI-ProteinID:
XP_017308028
Ensembl:
ENSIPUG00000017760
UniProt:
W5UIV6
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All DBs
Position
22:complement(8289976..8302836)
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AA seq
790 aa
AA seq
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MIPITELRYFVDTQPAYRILKPWWDVFTDYLSVVMLMIAVFGGTLQVTQDKMICLPCKWV
VNETCRKYFEAAFEPQGIRYDLDRHQYNYVDAVCYENKLHWFAKYFPYLVLLHTLIFLAC
SNFWFKFPWTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKALGKMNGSIDKKASC
VSEDVEASVSMLSTTKFRFDQGIVDHSENGVLDKKEGEQAKALFEKVKKFRLHVEEGDIV
YRLYIRQTIIKVVKFILIICYTGYYVHNIQFSVDCSVDIENLTGYQMFNCAHPLATLFKI
LACFYISLVVVYGMICMYTLSWMLRRSLKKYSFESIREESSYSDIPDVKNDFAFMLHMID
QYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQEKLELHLFMLSGIPD
TVFDLLELEVLKLELIPDITIPPIIAQLINLSEMWLYHTPAKIEAPALAFLRENLKSLHI
KFTDIKEIPLWIYSLKNLTELQLTGNLSAENNRYIVIDGLRELKGLKVLRLKSNLTKLPQ
VVTDVGMHLQKLSINNEGTKLMVLNSLKKMVNLTELELIRCDLERIPHSIFSLHNLQEID
LKDNNLKTIEEIISFQHLYRLVCLKLWYNKIAYIPIQIGTLTNLERLYLNRNKIEKIPSQ
LFFCRKLRYLDLSYNNLSNIPADIGSLQNLQYFAVTANRIEKLPPELFQCKKLRTLNLGN
NYLQSLPSRFGELVNLTQLELRGNGLECLPVELGECKLLKRSGLIVEEAIFNTLPTEVKE
QLWRAEKEAA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatcaccgagttgcggtactttgtggatactcagcctgcgtaccgcattttg
aagccgtggtgggatgtattcacagactatctgtctgtcgtgatgctgatgatcgcagtg
tttggaggaaccttgcaagtcacccaggacaagatgatctgcctgccttgcaaatgggta
gtaaacgaaacctgtcgaaagtatttcgaggctgcttttgaaccacagggaatccgatac
gaccttgacagacaccagtacaactacgttgatgctgtgtgctatgaaaacaagcttcac
tggtttgctaagtattttccatatttggtgctgctgcacacactgatcttcctggcttgc
agcaacttttggttcaagttcccttggactagttccaaactggaacattttgtctccatt
cttttgaagtgttttgattctccatggaccacacgagcattgtctgagacagtggttgag
gaaagtgatcctaaagctctagggaaaatgaacggctcaattgacaaaaaggcatcgtgt
gtgagtgaagatgtggaggccagtgtttccatgctgtccaccaccaagtttcgatttgac
caggggattgtcgaccactctgaaaacggcgtcctggacaaaaaagagggtgaacaggct
aaggcattgtttgaaaaggttaagaaatttaggcttcatgttgaggaaggagacatagtc
tacaggctttacatccgacaaacaattatcaaagttgttaaattcatccttatcatctgt
tacactggttactacgtccacaatattcaattcagtgttgattgtagtgtagacattgaa
aatcttactggttatcagatgtttaattgcgcccatccacttgccacacttttcaaaatc
ctggcatgcttctacataagtcttgttgttgtgtatgggatgatctgcatgtacacactc
agctggatgctccggcgttccctcaagaaatactcctttgagtctatcagagaagagagc
agctacagtgacattccagatgtgaagaatgactttgccttcatgttacacatgattgac
cagtatgatcccctctactcaaagcgctttgctgtcttcctctcagaagtcagcgaaaac
aaacttcgccagcttaacctcaacaacgagtggacactggagaagcttcgacaaagaatc
acgaagaactctcaagagaagttagagctgcatctgtttatgcttagtggaattccggat
acagtcttcgacttgctggagctggaggttcttaagttggagcttatccctgatatcacc
atcccacccattatcgcccagctcataaacctgagcgagatgtggttgtatcacaccccg
gctaaaatagaagcaccagcacttgcgtttttgagagaaaatctgaaatccttgcacata
aagttcactgacatcaaggaaatacctctttggatctacagtttgaagaacctgaccgag
ctgcagcttacagggaatctcagtgctgagaacaatcgctacattgtgattgatggactg
cgagaactaaaaggtctcaaggttcttagactgaagagcaacctgactaaactgccacag
gtcgtcactgacgttgggatgcacctgcaaaagctctccatcaacaacgagggcaccaaa
ctgatggttcttaatagcctgaagaagatggtgaatctgacggagctggagctcattcgc
tgcgacttggagcgcatcccccattccatcttcagcctccacaacctgcaggagatcgat
ctgaaggacaacaacctgaagaccatcgaggaaatcatcagctttcagcatctttatcga
ctcgtgtgcctgaaactgtggtacaacaagattgcctacatccctatccagataggcact
ttgaccaaccttgagcgtctatacctgaaccggaacaagattgagaaaatcccaagtcag
ctgtttttctgtcgcaagctgaggtatcttgatttaagttacaacaatctatcgaacatc
ccagctgacatcgggagtcttcaaaatctgcagtatttcgctgtaactgcaaacaggatt
gagaagcttcctcctgagctgttccagtgtaagaagctgcgcacactgaacttggggaat
aactacctacagtctttgccatctcgtttcggtgagctggtcaacctgacgcagctggag
ctcagagggaacgggcttgagtgtctgcctgtggagctgggagagtgtaaactgctgaag
cgcagcggcctgatcgtcgaggaggctattttcaatacccttcccactgaggtcaaagag
cagctctggagggctgaaaaagaggcagcgtga
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