Ictalurus punctatus (channel catfish): 108256056
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Entry
108256056 CDS
T04658
Name
(RefSeq) sin3 histone deacetylase corepressor complex component SDS3
KO
K19201
Sin3 histone deacetylase corepressor complex component SDS3
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108256056
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108256056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sds3
Retrotrans_gag
Motif
Other DBs
NCBI-GeneID:
108256056
NCBI-ProteinID:
XP_017308039
Ensembl:
ENSIPUG00000018099
UniProt:
W5UCI4
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All DBs
Position
22:complement(18319474..18331522)
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AA seq
318 aa
AA seq
DB search
MASTLLSPMVDYYNDEEELDSVDEDDERSFRGRDSEEDTEDASETDLAKHNEDDYVELKE
QMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERLRNADLFLQLETEQVERNYIK
EKKAAVKEFDDKKVELKENLIAELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPN
DPVPIPDKRRKPAPAQLNYLLTEEQIMEDLRTLNKLKSPKRPASPSSPEHLPTTPMESPT
QRYEARIEEGKLYYDKRWYHKSQAIYLESKDNTKISCVISSVGTSEIWVRKTSDSTKMRI
YLGQLQRGAFLIRRRSAV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgactttactgtcaccaatggtggattattacaacgacgaagaagagctggac
agcgtggacgaggacgatgagcggagtttcagaggcagagactcggaagaagacaccgaa
gacgctagcgaaacggacctggccaagcacaacgaggacgactatgtggaactcaaagaa
cagatgtaccaagacaagctggcgtcgctaaaaaggcagctgcaacaactccaagaaggc
actctgcaggagtatcagaagaggatgaagaaacttgatcagcagtataaagagagactc
cgtaacgcagatctcttcctccaacttgagacggagcaggtggagagaaactacatcaaa
gagaagaaagcggcggtgaaggagttcgacgacaagaaagtggagctgaaggagaactta
atcgccgagctggaggagaagaagaagatgatcgagaacgagaagttaaccatggagctg
acgggagattccatggaggtgaagcccatcatgacccgtaagctgaggaggcgacccaac
gatcccgtccccattcccgacaaacgcaggaaacctgctccagctcagctgaactattta
ctcacggaagagcaaataatggaggacctgaggacactaaacaagctcaagtcaccgaaa
agaccagcttccccgtcttctcctgaacacctcccgaccacacccatggaaagccccacc
cagcgctacgaggctcggatagaagaaggaaaactgtactacgataaaagatggtaccat
aagagtcaggccatctatctggagtcgaaggacaacaccaagatcagctgcgtcatcagt
tctgtcggaaccagcgagatctgggtgaggaagaccagcgacagtacgaagatgaggatt
tatttaggtcagctccagcgtggtgccttcctcatcagacgccgctcagcggtctag
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