Ictalurus punctatus (channel catfish): 108256070
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Entry
108256070 CDS
T04658
Symbol
dnm1b
Name
(RefSeq) dynamin-1 isoform X1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108256070 (dnm1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108256070 (dnm1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108256070 (dnm1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108256070 (dnm1b)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
108256070 (dnm1b)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
108256070 (dnm1b)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
108256070 (dnm1b)
RhoA-dependent endocytosis
108256070 (dnm1b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108256070 (dnm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
MMR_HSR1
Ldh_1_N
DUF5130
Motif
Other DBs
NCBI-GeneID:
108256070
NCBI-ProteinID:
XP_017308068
Ensembl:
ENSIPUG00000017129
UniProt:
A0A2D0PN96
LinkDB
All DBs
Position
22:complement(8815743..8858219)
Genome browser
AA seq
856 aa
AA seq
DB search
MGNREMEDLIPLVNRMQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGKDFLPRG
SGIVTRRPLVLQLINCPTEYAEFLHCKGKKFTDFEEVRQEIEAETDRLTGQNKGISSVPI
NLRVYSPHVLNLTLVDLPGMTKVPVGDQPADIEFQIREMLMQFVTKENCLLLAVSPANSD
LANSDALKIAKEVDPQGVRTIGVITKLDLMDEGTDARDILENKLLPLRRGYVGVVNRSQK
DIDGKKDITAAMTAERKFFLSHPSYRHLAERMGTPYLQKVLNQQLTNHIRDTLPGLRNKL
QSQLLSIEKEVEEYKNFRPDDPSRKTKALLQMVQQFAVDFEKCIEGSGDQIDTYELSGGA
RINRIFHERFPFELVKMEFDEKELRKEISYAIKNIHGIRTGLFTPDMAFETIVKRQIAKI
KEPCHKCVDMVISELVNTVRQCTKKLAQYPMLREEMERIVTQHIRDRDSRTKDQVMLLID
IELAYMNTNHEDFIGFANAQQRSSQMSKKKTTGNQDEIMVIRKGWLTINNIGIMKGGAKE
YWFVLTAETLSWYKDDEEKEKKYMLPVDNLKLRDIEKSFMSSKHIFALFNTEQRNVYKDY
RQLELACETQEEVDSWKASFLRAGVYPERIVQSESSEESSSDSFMHSMDPQLERQVETIR
NLVDSYMAIVNKTVRDLMPKTIMHLMINNTKEFIHADLLAHLYSCGDQNSLMEESAEQAQ
HRDEMLRMYHALKEALSIIGDISTTTVSTAMPPPVDDSWLQVQGGPSGRRSPMSSPTPQR
RAPPGPPRPGARAAPGPPAAGAPPVPSRPGASPDPHGGPPPQVPSRPNRAPPGVPSRRVP
ASATRPNRSTDFLTDY
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaccgggagatggaggatttgattccgctggttaaccgaatgcaggatgcgttt
tctgcgatcggacagaatgccgacctggaccttccccagatcgctgtggttggcggtcag
agcgcagggaaaagctccgtactggagaacttcgtggggaaggattttttgcctcgaggc
tctggcattgtgactcgtcgccccctggtgttgcagctgatcaactgtccaacagaatat
gccgagtttctccactgcaaagggaaaaagttcactgattttgaggaagtgcgtcaagag
atcgaagcagaaacagaccggctcactggacagaacaaaggcatctcttcagtacccatc
aacctgagagtctactcccctcacgtcctgaatctgactctggtggacttgcctggaatg
accaaagtgccggtgggcgatcagccagctgatattgagttccagatcagggaaatgctc
atgcagtttgttacaaaggagaactgtttactgctggccgtctctcctgccaactcagac
cttgccaactctgatgctctcaagattgccaaggaagttgaccctcaaggtgtgagaaca
attggtgtgatcactaaactggacctgatggatgagggtacggatgcacgtgatatcttg
gagaacaagctccttcctctgcgtagaggctacgtcggagtcgtgaaccgcagtcaaaaa
gatattgatggaaaaaaggacattactgctgccatgactgctgagaggaagttcttcctc
agccacccttcctatcgtcacctggctgagcgcatggggacgccttacctgcagaaagtc
ctcaatcagcaactcaccaatcacattcgagacaccctgccagggctgaggaacaagctg
caaagccagttgctgtccattgagaaggaagtggaagagtacaagaacttccgcccagat
gatccctctcgcaagaccaaggccctccttcaaatggttcagcagtttgcagtggatttt
gagaagtgtatcgagggatctggtgatcagatcgacacttatgagctgtccggtggagcc
aggatcaaccgtatctttcatgagcgttttccctttgaattggtcaagatggaatttgat
gagaaagagttgcgtaaggagatcagctatgctattaaaaacatccatggtatcaggact
ggtctcttcacccctgatatggcctttgagacgatcgtgaagagacagatagctaagatc
aaagagccatgtcataaatgtgtggatatggtcatctctgagctggtcaatacagtcaga
cagtgcactaagaagctggctcagtacccgatgttgagggaagaaatggagaggattgtc
acacagcatatccgtgacagagacagtcgcaccaaggaccaggtgatgctactgattgac
attgagctggcctacatgaacaccaaccatgaagatttcattggttttgctaatgcccaa
cagagaagcagtcagatgagtaaaaagaagactacagggaatcaggatgagataatggtg
atcagaaagggctggctaaccatcaataacattggcatcatgaagggaggagcgaaggag
tactggtttgtgctgactgctgagacactgtcctggtacaaagatgatgaggagaaagag
aagaaatacatgctgcctgtggataacctgaagctccgagacattgagaaaagcttcatg
tccagcaaacacatctttgccctcttcaacactgaacaaaggaatgtgtataaggattac
aggcagctagaattagcgtgtgagacacaagaagaggtggacagctggaaggcctccttc
ctgcgtgctggtgtttacccagaacgcattgtgcagagtgaaagcagtgaggagagcagc
tcggacagtttcatgcactccatggaccctcagctggagagacaggtggagaccatccgc
aacctggtagactcctatatggctatcgtcaacaagactgtgcgcgatctgatgcccaag
accatcatgcatcttatgatcaacaatactaaagagttcatccatgctgacttgctggcc
cacctctattcatgtggagaccagaacagtctgatggaggaatcggccgaacaggcgcag
cacagggatgagatgctgcgcatgtaccatgcactcaaagaagccctgagcattattgga
gacatcagtactaccacagtgtccactgccatgccaccaccagtggacgactcctggcta
caggtgcagggaggaccctcaggacgaagatcccccatgtccagccccacacctcagcgt
cgagctcctcctggaccccctcgccctggagctcgtgctgctcctgggccacctgctgcc
ggagctccacctgtcccctccagacctggagcctccccagacccccatggtggcccacca
ccccaagtgccctcacgccccaatcgtgctcctccaggagttcccagtcgacgtgtgcca
gcatcagcaacaagacccaacagatccacagatttccttacagactattaa
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