Ictalurus punctatus (channel catfish): 108256109
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Entry
108256109 CDS
T04658
Symbol
syngap1b
Name
(RefSeq) synaptic Ras GTPase activating protein 1b
KO
K17631
Ras/Rap GTPase-activating protein SynGAP
Organism
ipu
Ictalurus punctatus (channel catfish)
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Paralog
GFIT
Motif
Pfam:
DAB2P_C
PH_RASGAP
RasGAP
C2
PH
PH_2
Motif
Other DBs
NCBI-GeneID:
108256109
NCBI-ProteinID:
XP_017308152
Ensembl:
ENSIPUG00000006816
UniProt:
A0A2D0PQ73
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Position
23:complement(19242752..19271164)
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AA seq
1238 aa
AA seq
DB search
METPPIAPPQPFRQSSFLGRRLKGSIKRAKSQPKLDRTSSFRQMILPRFRSADQDRTRLM
QSFKESHSHESLLSPSSAAEALDLTLDEDAIIKPVHSSILGQEYCFEVTTASGTKCFACR
SAAERDKWIENLQRAVKPNKDNSRRVDNVLKLWIIEARELPPKKRYYCELCLDDMLYART
TSKPRTDTVFWGEHFEFNNLPAVRNLRLHLYKETDKKRRKEKSTYLGLVSIPISSITGRQ
FVEQWYPVIQPSVLAKGGGVGGGKIINASLRLKSRYQTMSILPMELYKEFAEYVTNNYRT
LCAVLEPLLSVKSKEEVACALVHILQSTGKAKDFLSDMAMCEVDRFIDREHLIFRENTLA
TKAIEEYLKLIGHKYLKDALGDFIRALYESEENCEVDPMRTPPSVLLDHQANLRMCCELA
LCKIVNSHCVFPRELKEVFASWRVRCAERGREDIADRLISGSLFLRFLCPAVMSPSLFNL
TQEYPDEQTSRTLTLIAKVLQNLANFSKFGSKEEYMCFMNEFLEMEWGSMQQFLYEISNL
DSISNAGAFEGYIDLGRELSVLHSLLWEVMAQLSKDAIIKLGPLPRLLNDISMALRNPHL
QRQPSHQTDRQPPERQTDRLLSRPSFNRGISSEFQNLMMRDLNSSIDITRLPSPTSAMPS
GVVPPSRAGMGAYVDRDHPHRASSKDVFYVTRPPLARSSPAYCTSSSDITDPDPKVLSVN
ERISMMDLQDSRMNSVSNLQSVGDMLNSPQASLAGFGGLGGAGGGLGGQLRAGGGRMSAG
SGGSSVSGGLRLSQLSQMGTTTDSLSQQQQQQAAALRYPLSFQNPLFHMAADGPQVQRQH
SRAQVPPPLLLAPEPDSSHPAYLPQFARGAFSRSEDLSTLRPGPHLGQPSIVHSHSYSDE
YSRGDYARRQLSMHMQENLQQQQMMGMASQTGTSHSSLASPPTTVQPVRQSSMAPPPTQR
MKSQTSHQLSVSSAAVATPPSKTRPPSGNLLQSPESGFGGRQPGPRQQLSVKDNTAPGLP
HQHSSTRESQGSQGSQGGTPQSTQQSHKERQHSQQHLLKPSISKQGSSPNTLNPPTPASE
RTVAWVSNMPHLSADIESSRIEREEFKLKEYSKSMDESRLDRVREYEEEIHSLKERLMMS
HRKLEEYERRLVTQEQQTNKILLQYQSRLEDSERRLRQQQMEKDSQIKGIIDRLMAVEDE
LRVGVAPEHKARMFADQGRRQSILVQPRLAPVPPRMHR
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atggagacccctcccatagccccccctcaacctttccgacaatccagttttcttggccga
aggctgaaggggtctataaaacgagcgaagagtcagcccaagctggaccgcaccagcagc
ttccgccaaatgatcctcccacgattccgcagtgctgatcaggacaggactcgtctgatg
cagagcttcaaagagtcacattcccatgaatccctgctgtctcccagtagtgcggccgaa
gcactggacctcacgctggacgaggacgccatcatcaaaccggttcactccagcatttta
gggcaggagtactgctttgaggtgacgactgcttcgggaacaaagtgtttcgcctgtcgg
tcggctgcagaaagagacaaatggatcgagaatttacagagagctgtgaagcccaacaaa
gacaacagccggagggtggacaacgtcttgaagctctggatcatcgaggcccgggagctg
ccgcccaaaaaacgctactactgtgaactgtgtttggacgacatgctgtacgcacgcacc
accagcaaaccccgcaccgacactgtcttctggggtgagcacttcgagttcaacaacctc
ccggctgtccgcaacctccggcttcatctctacaaagagacggacaagaaaagacgcaag
gagaaaagcacatatctaggactggtcagcatccccatatccagcatcaccggtcgacag
tttgtagagcaatggtaccccgtgattcagcccagtgtcctggccaaaggcgggggtgta
ggagggggtaaaatcatcaacgcctctttgcgactcaagtctcgctaccagaccatgagc
atcctgccaatggaactgtacaaagagtttgccgagtacgtcaccaacaactaccggacg
ctgtgtgccgtcttagagcctctactgagtgtcaaaagcaaagaggaggtagcctgtgca
ctggtgcacatcctacaaagcacagggaaggcaaaggactttctttcagacatggcgatg
tgtgaggtagaccgattcattgaccgagagcatcttatcttccgtgagaacaccttagcc
accaaagctatagaagagtacctcaaactcatcggacataagtacctcaaggatgcttta
ggtgacttcatccgagcgctgtatgagtcagaggagaactgtgaggttgatcccatgagg
actccaccttccgttctactggaccatcaggcgaatctacgcatgtgttgtgagcttgct
ctctgcaaaatcgtcaactcacattgcgtttttccacgtgagctgaaggaggtctttgcg
tcttggcgagtacgctgtgcggagagggggagggaggacatagctgaccgcctgatcagt
ggctcgctcttcctgcgcttcctttgtccagccgtcatgtccccatcgctgttcaacctc
acccaggaatacccggacgagcagacttcacgcacgctcaccctcatagccaaagtgctg
cagaacctcgctaacttctccaagtttggcagtaaagaggagtatatgtgcttcatgaat
gagttcttagagatggagtggggctccatgcagcagttcctgtatgagatctccaatcta
gacagcataagcaatgccggggcttttgagggatacattgacctgggaagagagctttct
gtcctgcacagcctcctgtgggaggtcatggctcaactcagtaaggatgccattatcaag
ctcggaccattaccccgcctcctgaatgacatcagcatggcccttcgcaatcctcatctc
caaaggcagcccagtcaccagacagacagacagcctccggaaagacagacagaccggtta
ctctctcgacccagcttcaacaggggaatatcctccgagtttcagaacctcatgatgagg
gaccttaacagttccatagatatcactcgcttaccttccccaacctctgccatgcccagt
ggtgtcgttcctccatcgcgagctggaatgggtgcttacgttgatcgggatcatccgcat
cgggcctcttctaaagatgttttctatgtcacccgtcccccgctggcccggtccagtcct
gcgtactgtacgagcagctccgatatcaccgacccagacccaaaggttctgtccgttaat
gaacgtatttctatgatggacctccaggactcaagaatgaacagcgtctctaacctgcag
tctgtgggggacatgctcaactctccccaggcctcacttgccgggttcggtggccttggt
ggtgctggaggaggcctcggaggtcagctgcgtgccggtggagggcggatgtcagccggt
tcgggtggctccagtgtgtccggcggcctgcgactaagccagctgagccagatggggacc
actaccgactcgctgtcccagcagcagcagcagcaggccgcggctctacgttacccgctc
tccttccagaaccctctcttccacatggctgccgacggtcctcaagtccagcgccagcac
agtcgtgctcaggtgcctccacccctcttgctggctccggagccagactcctcccaccca
gcatacttgccgcagttcgcccgcggcgccttctcccgcagcgaagacctctccacactc
agacccggaccacacctcggccagcccagcatcgtccactcccacagctacagtgacgaa
tacagccggggagactacgcccgacggcaactctctatgcacatgcaggaaaacctccag
cagcagcagatgatgggcatggcctcacagacgggcacgtctcattcctcgctcgcctcg
cctcccaccactgtccagcctgtccgtcagagctccatggctccgcctcccacacagcgc
atgaagtctcaaacctcccatcagctttctgtgagctcggctgccgttgccacaccccct
agcaagacgagacctccgagcggaaatctgctccagtctcctgagtcgggtttcgggggg
aggcagccgggtccacggcagcagctctccgtcaaggataacaccgcccccggccttcct
catcagcacagctccacccgcgagagccagggatctcagggttctcaagggggaacacca
cagtcgacgcagcagtcgcacaaggagcggcaacactcacagcagcacttactcaagcct
tccatcagcaaacagggctcatctcccaacactttgaaccctcccacccctgcctcagaa
aggacagtcgcctgggtgtcgaacatgccacacctttccgctgacatcgagagctcacgc
atcgagagagaagaatttaagctgaaggagtattcaaaaagcatggacgagtcacgttta
gaccgggtacgggagtacgaggaggagatccattctctgaaggagcgtctgatgatgtcc
caccgcaagctggaggagtacgagcggaggctagtcactcaggagcaacagaccaacaag
atcctgctgcagtaccagagccggctggaggacagcgagaggaggctgaggcaacagcag
atggagaaggactcccagattaaaggaataatcgacagactcatggcggtggaggacgag
ctgagggtaggggtagcaccagagcacaaagccaggatgtttgcagatcaggggaggcgg
caatccatcctagtgcagccccgtctcgcgcccgtccctcctcgaatgcacaggtaa
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