KEGG   Ictalurus punctatus (channel catfish): 108256174
Entry
108256174         CDS       T04658                                 
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108256174
   04121 Ubiquitin system [BR:ipu04121]
    108256174
Enzymes [BR:ipu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108256174
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108256174
Ubiquitin system [BR:ipu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108256174
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP KH_2 zf-RING_2 zf-C3HC4 RING_XB3-XBAT31 Prok-RING_4
Other DBs
NCBI-GeneID: 108256174
NCBI-ProteinID: XP_017308248
Ensembl: ENSIPUG00000006083
UniProt: A0A2D0PNT3
LinkDB
Position
23:18811437..18824861
AA seq 525 aa
MRCFSSLALRVFVSHSLLAMPSLLVLSGIMEKNGGYGSELAASGFGTESLLAPPDEEEEE
SRALRVALGQLSLLGLGESEEGAGVQERSNNNNNHHHHGHSHANSVGGGGGGGGGGGGAG
EAGILQGKSKLCALYESSGSETKARGCNITECVPVPSSEHVAEIVGRQGCKIKALRAKTN
TYIKTPVRGEEPVFLITGRKEDVALARREIISAAEHFSMLRASRNKLGVSFNGSPPALLP
GQTTIQVRVPYRVVGLVVGPKGSTIKRIQQQTCTYIVTPSRDRDPVFEITGSPGNAERAR
EEIEAHIASRTGTLHDHNNENDCLATENSTNGGPESRLQHAWGLQGGQRKPLASSYRQNF
SDAVLGGTGSGSVGVGMGIYSKSDFSTPTNGDKPCSYFGSEGSQSWGDPDYPKQVAYYVQ
QRSKSFGGLPLPLTRLSPGLPEPSGNSSAGSTGIGSAHAQARRAHSEPTSTRDCMTCFES
KVTAALVPCGHNLFCMECAIRICELNHPECPVCHTLVTQAIRIFS
NT seq 1578 nt   +upstreamnt  +downstreamnt
atgcgctgcttctccagtctcgctcttcgcgtctttgtctcacactctttgttagccatg
cctagcctgctggtgctgtcagggatcatggagaaaaatgggggctacggctcggaactg
gccgcctccggctttggtaccgagagcctcctggcgccgcccgacgaggaggaagaggag
tcgcgggcgctgcgggttgcgctgggccagctctccttgctcgggctcggggaaagcgag
gagggcgctggagttcaggagcggagcaacaacaacaacaatcaccaccaccacggccac
agccacgccaacagcgtcggcggaggaggtggtggtggtggaggaggcggtggtgctgga
gaagccgggatcttacaaggcaagagcaagttgtgcgccctgtacgagagctccggttct
gagaccaaagcgcgcggctgcaacatcaccgagtgtgtgcccgtgcccagctcggaacat
gtggcggaaatagtgggcaggcaaggttgtaaaatcaaagccttgcgggcgaaaaccaac
acctacatcaagaccccggtgcggggtgaggagcccgtctttctcattaccggtcgcaag
gaagacgtggcgttggctagacgcgagatcatctcagcggctgagcacttctccatgctg
cgtgcatcccggaacaagctgggcgtgtcatttaatggttctccccccgccctgctgcca
ggccagaccaccatccaggtgcgcgtgccttaccgtgtggtgggcctggtggtgggcccc
aaaggctccactatcaagcgcatccaacagcagacgtgcacgtacatcgtgactccgagc
cgcgatcgcgacccggtcttcgagatcaccggttcgccgggcaacgcggagcgagcgcgg
gaggagatcgaggcgcatatcgcttcgcgcaccggcaccctccacgaccacaacaatgag
aacgactgcctggccacggagaacagcaccaacggtgggccggagagccgcctacagcac
gcatgggggcttcagggcggtcagcgcaagccactcgctagcagctaccgccagaatttc
tccgacgccgtgctgggaggtaccggaagcggaagcgttggagtcggtatgggcatttac
agcaaatccgacttctcgacccctaccaacggagacaagccatgctcttattttggttct
gaagggtcccagagctggggtgaccccgattatcccaagcaggtggcctactatgtccag
cagcgctcaaagagcttcggaggcctgcccttgcccttgaccagactgtctccgggtctt
ccggaaccttctggaaacagcagtgccggatccactggcatagggtcagcccatgcccag
gctcgacgtgcccacagcgagcccacctcgacccgagactgcatgacttgcttcgagagc
aaagtgacggccgctctggtgccctgcggccacaacctcttctgcatggagtgcgccatc
cgcatctgcgagctgaaccatcccgaatgccccgtctgccacacgctcgtcacccaggcc
atccggatcttctcttaa

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