Ictalurus punctatus (channel catfish): 108256325
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Entry
108256325 CDS
T04658
Symbol
cspg5a
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ipu00535
]
108256325 (cspg5a)
Proteoglycans [BR:
ipu00535
]
Cell surface proteoglycans
Others
108256325 (cspg5a)
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GFIT
Motif
Pfam:
Neural_ProG_Cyt
EGF
Motif
Other DBs
NCBI-GeneID:
108256325
NCBI-ProteinID:
XP_017308527
Ensembl:
ENSIPUG00000009779
UniProt:
A0A2D0PR94
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Position
23:20395426..20421929
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AA seq
520 aa
AA seq
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MKRNMGFCSGCWISVMSALLALLLIPLDAQAKSVSGNMTETASPSNSTSLPAESDEVKLD
DEMSKPISNMFLILRSGRKPRGGEELGSGLQEGPDHFLTSTPSPKEMIIEDSKISPDSQE
NDHLLPAKNTPPPSASTENLLHGTEDLMGSAVVDLDETSNLNRQEPSTAVTPFPSHSPSN
TAYLTVDYYTRSPGNVLVPPAPTEHELQGREPTAWTMPNKYPYHPPYSKTVPPSSEIDTT
KPDEYDDELTSTPTPPPPRTFHPHFPNPFIPARGKEPPTNRNKKLGKSSSAECQMGSVLM
NGTCKSQCDMMPNYCLNGGQCFVLEGSGVFCRCNIQDYVWHKGARCESVITEFQVMCIAI
GTSVLTVLLLFMIVVCFAKKLHVLKTENNKLRKRSSSKYRPSSEQHNDNFSLSTIAEGSN
PNVRKLCDSPPHARALAYYDNIICQKTMSRYTWECKTKEEPSCEDDPNSQNKLEDAVKSP
PPKEDESLNIQNSLTPKHENHKVLGEENSSEVNSLQNNMM
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaacatggggttctgctcaggatgctggatctctgtcatgtctgcgctcctc
gcgctgctcctcatcccgctggatgcacaggctaaatctgtgtcgggaaacatgacagag
acagcgagcccttcaaactcaacctccttgccagcggaaagtgacgaggtgaagctggat
gatgagatgtccaaaccgatcagcaacatgttcctcatcctgcgttctggacgcaagccc
agaggtggagaggagctcggaagtggacttcaggaaggtccagaccattttctgacttcc
actccgtctcctaaagagatgataatagaggactcaaaaatcagccctgattctcaggag
aatgaccatcttctgcctgcaaaaaatactcctcctccaagtgcgtccactgagaacctc
ttgcatggcactgaggatctaatggggtctgcggtggttgatttggatgagacctcgaac
ctgaaccgacaggaaccttcaactgcagtgaccccgttcccttcgcattccccgtccaat
acagcatacctcactgtagactattacaccagatcccctggtaatgtgctcgtccctccg
gctcctaccgaacatgagcttcagggtcgcgaacccaccgcttggacgatgcccaacaag
tacccctaccaccctccgtacagcaaaactgtccctccgtcctcggaaatagacaccacc
aaacccgatgagtacgacgatgagctgacctccactcctacaccacctccacccaggacc
ttccatcctcacttccccaatcccttcatccctgctcggggaaaagagccacccactaac
cgtaataaaaaattgggcaagagcagcagtgccgagtgtcagatgggctctgtgctcatg
aacgggacctgcaagtctcaatgcgacatgatgccgaattattgtctcaatgggggccag
tgcttcgtgctggaaggatctggagtcttctgcaggtgtaacattcaggactacgtgtgg
cacaaaggcgctcgctgtgagtccgtcatcaccgagttccaggtcatgtgcatcgccatc
ggcacctcggtgctcaccgtcctgctgctcttcatgatcgtcgtctgcttcgccaagaaa
ctgcacgtgctcaagaccgagaacaacaaactgcgcaagcgcagcagcagtaagtaccgc
ccgtcgtcggagcagcacaatgataatttctctctgtccaccatcgctgagggctccaac
ccaaacgtaaggaaactgtgcgactctcctcctcatgctcgtgctttggcttactatgat
aacattatctgtcagaaaacgatgagcagatacacctgggagtgtaagaccaaagaggag
ccgagctgtgaggacgatcctaactcccagaataagctggaggatgcggtgaagtctcct
ccacccaaagaggacgagtctctgaacatccagaactcactcactccaaaacacgagaac
cacaaggttctgggtgaggagaactcctcggaggtaaactcgctgcagaacaacatgatg
tag
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