Ictalurus punctatus (channel catfish): 108256356
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Entry
108256356 CDS
T04658
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108256356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108256356
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108256356
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Type_ISP_C
Motif
Other DBs
NCBI-GeneID:
108256356
NCBI-ProteinID:
XP_017308614
Ensembl:
ENSIPUG00000012943
UniProt:
A0A2D0PRG6
LinkDB
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Position
23:6351629..6401080
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AA seq
1864 aa
AA seq
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MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAESEKLSPPAGDSKS
SSSTLPPIKSKSTFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGSAPDNT
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQNIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKISWSMASRKRDRQLQEAKQMER
ERHRQHSPLSQQEPESPQLQQLPDTPAKSQSLSGEEVNGGSGVEGGTAEHESPHYESPEP
ENGSDFGPVENEQTEADQATAAEQSAAERGSRAPEEEDSLNYEEKAQEIVQSILQEVVST
VTGDAKESVGGEVEPEATPTSLEEEGGLSSDSENVHANGIPGTPISASFTPSLPDDRLSV
SSSDTQESGAPAGPAPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVL
SLQLLLSILQNAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNF
KTHLKMQIEVFFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNA
ANIFERLVNDLSKIAQGRGGHELGTTPLQDLTLRKKGLECLVSILKCMVEWSKDQYVNPN
SQTTLGQEKPSEQEANESKHPETINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVL
KQQKEIIEQGIDLFNKKPKRGIQYLQEQGMLGTTPEDIAQFLHQEERLDSVQAGEFLGDN
DRFNKEVMYAYVDQMDFQGKDFVSALRLFLEGFRLPGEAQKIDRLMEKFAARYLECNQRQ
TLFASADTAYVLAYSIIMLTTDLHSPQVKNKMTKEQYIMMNRGINDSKDLPEDYLSSIYN
EIAGKKISMKETKELPLKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFT
SATHLEHVRPMFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFTIQLERD
AYVQALARFTLLTASSGIAEMKQKNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELA
QLIGTGVKARYISGTVRGKDGFIISTKEQSPDEYLGLVGGNVDRKQIASIQESIGETSSQ
SVVVAVDRIFTGSIRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGR
IRLQWSRIWEVIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRP
FEHIMKKNRSPTIRDMVVRCIAQMVNSQAGNIRSGWKNIFSVFHLAASDQDESIVELAFQ
TTGHIVTNVFEKHFPATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSDRPQ
AFKDYTSDDMNVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTY
EKHWWQDLFRIVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLSNVLLD
NILSQLYWCVQQDNEQLARSGTNCLENVVILNGEKFTPETWDKTCNCMLDIFKTTIPHAL
LTWKPAGPDGDRVTQPDSDKQPDSTSQKSVDIQTRAEDQHSVSSVEKDKALAENRRPSQF
SLASGVQEQRLFAALLIKCVVQLELIQTIDNIVFFPATSKKEDAENLAAAQRDALDADVQ
VETQDQGMYRYLTSEQLFKLLDCLLESHRFAKDFNSNNEQRTALWKAGFKGKSKPNLLKQ
ETSSLACGLRILFRMYTDPSRRDAWEEVQRRLLNVCSDAVDYFLKLTSESHREAWTNLLL
LFLTKVLKISDERFKAHASRYYPLLCDIMQFDLIPELRAVLRKFFLRIGLVFHIAHTLEP
QQEA
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggcaaaaagacgaaaaacatgtttttaacccgagctctggaaaagattttg
gccgataaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtagcg
ttggaggaaataaaagcagaatcggagaaactaagcccccctgctggagacagcaagtcg
agttccagtaccctgcctcccatcaaatccaagagcaccttcatcgaagcggataaatat
ttcctgccgttcgagttagcctgtcagtccaaatgtccccgcatcgtcagcacatcacta
gactgtttacagaaactcatagcttacggtcatctgacgggcagcgccccggacaacact
gccccggggaagaagctcatcgacaggatcatcgagacgatctgcggctgcttccagggc
ccgcagaccgacgagggagttcagcttcagatcataaaggccttgctgacagcggtgacc
tcccagaatatcgagatccatgagggcacggtgctgcaggctgtcaggacgtgctacaac
atctacctggccagcaagaacctcatcaatcagacgacagcgaaagccaccctcacccag
atgcttaacgtcatcttcgcccgcatggagaaccaggcccttacaaatcacaagatcagt
tggtctatggcgtccagaaagcgtgaccgtcagctccaggaggcgaagcagatggagagg
gagaggcacaggcagcattctccgctcagccagcaggagcctgagtctccacagctccag
cagctcccagacaccccggccaagagtcagagcctgtcgggcgaggaggtgaacggaggg
tcaggggtggagggcggtacggcagagcacgaatcgccccactacgagagcccggagcca
gagaacggctctgatttcggccctgtagagaacgaacagaccgaggcggaccaggccacc
gccgcagaacagagcgcggccgagcgtggttcacgagctcctgaagaagaggacagcctg
aattatgaggagaaggctcaggaaattgtgcagagtatactgcaggaggtggtcagcact
gtgactggagatgctaaggagagtgtaggcggggaagtggagccagaggccacgcctaca
tcgctggaggaggagggtggcctgagcagcgacagtgagaacgtccacgctaacggcatc
cctggcacacccatctctgccagcttcactccgtccctgcctgacgacagactgtctgtc
tcgtccagcgacactcaggaatctggggctccagcggggcccgcaccgggtgcgaagttc
tcgcacattttgcaaaaagacgccttcctggtgttccgctccctctgcaagttgtccatg
aagcccctttcagacggcccgcccgacccaaaatcccacgagttgcgctccaaagtgctc
tcgctgcaattgctgctctccatcctgcagaatgcaggccctatcttcaagaccaacgag
atgttcatcaacgccatcaagcagtacttgtgcgtggcgctgtccaaaaacggcgtctcc
tccgtccccgaggtcttcgagctctccctgtccatcttcctgacactcctgtccaacttc
aaaacccacctcaagatgcagatcgaggtctttttcaaagagattttcctctacatcctc
gagacgtccacgagctcctacgaccacaaatggatggtcattcagacgctcaccagaata
tgtgcagatgcccagagtgtggtggatatctatgtgaattatgactgtgacctgaacgct
gctaacatatttgagaggttggtgaacgacctgtccaagatcgcacagggccgaggaggc
cacgagctgggcacgaccccgctgcaggatctgactttgagaaagaagggtctggagtgt
ctcgtgtcaatcctcaagtgcatggtggagtggagtaaggatcagtacgtgaaccctaac
tctcagaccactctcggccaggagaagccttctgagcaggaggccaacgagtccaagcac
ccagagaccattaaccgctatggcagcattaattctctggactccacagcttcctcaggc
atcggcagctacagcacgcagatgtccggtactgataatccagagcagttcgaagtgctc
aaacagcagaaggaaatcatcgagcaaggcattgacctgttcaacaagaaaccaaagagg
ggcatccaatatctgcaggagcaaggcatgctgggaacaacgccagaggacatcgctcag
ttcttacatcaggaggagaggctggattctgtccaagccggagagtttctgggagacaac
gatcgcttcaacaaggaagtgatgtatgcctatgtggaccaaatggacttccaagggaag
gactttgtgtcagccctgcgtctgttcctggagggcttccggctccctggggaagcacag
aaaatcgatcggctcatggagaaatttgcggctagatatttagagtgcaaccagcgacaa
accctgtttgcgagtgcagacacagcgtatgtccttgcttattcaatcatcatgttgact
acagaccttcatagtccacaggtgaagaataaaatgacaaaagagcagtacatcatgatg
aacagagggatcaatgacagtaaagacttgccggaggactacttgtcatccatctacaac
gaaatcgcagggaagaagatatctatgaaggagacgaaggaattgccgctcaaatcgaac
aaacaaagcgtggccagtgagaaacagagacggctgctgtacaacgtggagatggagcag
atggcgaagacggctaaggctctgatggaggcagtgagccacgttcaggccccgttcacc
agcgccacccacctggagcacgtcaggcctatgtttaagctggcctggaccccattcctg
gcggccttcagcgtgggtctgcaggactgcgatgacaccgaggtagcatctctgtgcctg
gagggtattcgctgcgccatcagaatagcttgcatcttcaccatacaattggagagagat
gcgtatgtgcaggctctggctcgcttcaccttgctcactgccagctctgggatcgcggag
atgaagcagaagaacatcgatactatcaagacccttatcacagtagctcacactgatggg
aattacctgggaaactcgtggcacgagattctgaagtgcattagtcagttggagctggcc
cagctcatcggtacaggggtgaaggctcgctacatatccgggactgttcggggcaaagat
ggcttcatcattagcaccaaagagcagagtccagacgagtacctgggcctcgttggtggg
aatgtagaccggaagcagattgctagcattcaagaatccatcggagagaccagctctcag
agcgttgtggttgctgtggacagaatattcacaggatccattagattggatggtaatgct
atagttgattttgtgcgctggctgtgtgctgtgtccatggacgagctggcctctccgacc
cacccgcgcatgttcagcctgcagaagattgttgagatctcctactacaacatgggccgc
atcaggctccagtggtccaggatctgggaagtgattggagatcatttcaacaaggtgggc
tgtaatcccaacgaggacgtcgctatcttcgccgtggattcgctcaggcagttgtccatg
aagtttttggagaagggagaactggccaacttcagatttcagaaggatttcttgaggccg
tttgagcacatcatgaaaaagaacagatcgcccactatcagagacatggtggtacgctgc
atagctcagatggtgaactcgcaggcggggaacatccgctcaggctggaagaacattttc
tcagtattccacctagcagcctcggatcaggacgagagcatcgtggagctcgccttccag
accaccggacacatcgtcacgaatgtatttgagaagcactttcctgccaccatcgactcc
ttccaggacgccgtgaagtgtctgtccgagttcgcctgcaacgcgtcgttccccgacacc
agcatggaggccatccgactgatccgccactgcgccaaatacgtctccgacaggcctcag
gcctttaaagactacactagcgacgatatgaacgtagccccagaggatcgggtgtgggtg
cgaggctggttccccatcctgttcgagctctcctgcatcatcaacaggtgcaagctggac
gtccgaaccaggggtctgacggtgatgtttgaggtgatgaagacgtacggtcacacgtac
gagaaacactggtggcaagacttgttccggatcgtcttcagaatcttcgacaatatgaag
ctgccggagcagcagaccgagaaagcagagtggatgaccacaacctgcaaccacgcactt
tatgccatctgtgacgtcttcacgcagtacttcgagtctctcagcaatgttctgctggac
aacatcctctctcagctctactggtgtgtgcagcaagataacgagcagctggcgagatcc
ggaaccaactgcttggagaacgtcgtgatcctgaacggagagaagttcacgcccgagacc
tgggacaagacgtgcaactgcatgctggacatcttcaagaccaccatcccacacgcgttg
ttgacgtggaagccggccgggccggacggtgatcgcgtgactcagccggactcggacaaa
caaccggactccacgtcccagaagtctgtggacatccagacccgggcagaggaccagcac
tctgtgagcagtgtggagaaggacaaggcgctggcagagaatcggagaccgagtcagttc
agtttggcttcaggagtccaggagcagaggctgttcgcagcactcctcattaagtgcgtg
gtgcagctggagctcatccagaccatcgacaacatcgtcttcttcccggccaccagcaag
aaggaggacgccgagaacttggcggcagcacagagagacgctctggacgccgacgtgcag
gtggagacgcaggatcagggaatgtaccgctacctgacctcggagcagctgtttaaactg
ctggactgcctgctggagtcgcatcgcttcgctaaagacttcaactccaacaacgagcag
aggacggcgctgtggaaggctggttttaaagggaagtccaaacccaacctgctgaaacag
gagacgagcagtctggcctgtggcctgcgcatcctcttccgcatgtacacagacccgagc
agacgggacgcctgggaggaggtgcagagacgtctgctcaacgtgtgcagtgatgccgtg
gattatttcctcaagctgacgtcggagagtcaccgcgaggcctggactaacctgctgctc
ctcttcctcaccaaagtgctgaagatcagcgatgaacggttcaaggcccacgcctcccgt
tactacccgctgctgtgtgacatcatgcagttcgacctgatccccgagctgagagccgtc
ctgaggaagttcttcctgcgcatcgggctcgtgttccacatcgctcacactctggaaccg
cagcaagaggcctag
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