Ictalurus punctatus (channel catfish): 108256388
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Entry
108256388 CDS
T04658
Symbol
pld1b
Name
(RefSeq) phospholipase D1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00564
Glycerophospholipid metabolism
ipu00565
Ether lipid metabolism
ipu01100
Metabolic pathways
ipu04144
Endocytosis
ipu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
108256388 (pld1b)
00565 Ether lipid metabolism
108256388 (pld1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108256388 (pld1b)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108256388 (pld1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108256388 (pld1b)
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
108256388 (pld1b)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
108256388 (pld1b)
Endosome - Golgi transport
Others
Others
108256388 (pld1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
DUF3785
Motif
Other DBs
NCBI-GeneID:
108256388
NCBI-ProteinID:
XP_017308689
Ensembl:
ENSIPUG00000017378
UniProt:
W5UIR9
LinkDB
All DBs
Position
23:complement(9630028..9672830)
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AA seq
1036 aa
AA seq
DB search
MSQQDLVTASTLQLVATDMTEIMENLDTRELDIGEGEDEFEGPGANSAEARIPFSVIYKM
KGFKEPEAQVFLTSFPITAKILEVERFACAQDRFNITNQRSVSKKLPAVFRIEMRHGNFT
WIVKRKEKHFMELHRELRTYKAFLKIPIPTRTHTERRQTVRYTRQMPTLPRGGGDELARE
EQVSSRKRQLEDYLNKLLKMPLYRNYHATMEFIEASQLSFIHDLGPKGLEGMVYKRSGGH
RIPGLNCCGHSKVCYRWSKRWLVVKDSFLLYMKPDSGSISFVLLVDKEFCVKMDSKDTET
KHGIRVDSLCRNLVLKFSSFRHARWWGQAIDDFVHKYGSAFLQDHRFGSFANVQENIPSK
WYVNGKTYMEDVATALEAAEEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQKGV
RIFVLLYKEVELALGINSEYSKRTLHQLHPNIKVMRHPDHVSSSVYLWAHHEKLVVIDQS
VAFVGGIDLAYGRWDDREHRLTDVGSVTRTLNTSAENVTEASLSMASPSNGPVQSNGKNS
GRDLEDQPKLRGHGKTRKSRFSIRKRLQRHGLVHGDSVSSAESSEENAESAQDLQADVIG
LMGNTRFWHGKDYCNFVHKDWIQLDKPFDDFIDRHITPRMPWHDIASVVHGKAARDVARH
FIQRWNFTKIMKPKYRSYPYLLPKSHTTATEIKHQVPGCVHTKVQVLRSASDWSAGIKYH
EESIHNAYVHVIENSKHYIYIENQFFISCADNKLVYNKIGDSIAQRIIKAYREGTKYRVY
VVTPLLPGFEGDINTGGGSALQAIMHFNYRTMVRGEHSIMSQLKKEMGDLWMNYISFGGL
RTHAELEGKLVTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVAVIYEDTETET
SVMDGQEYQAGRFGLQLRLECFRTILGAHTDSSIDISDPISDHFYKEVWMTTAARNATIY
QKVFRCLPSSDVRTSLELEGFLSKSGLDKDDPLKAQEELHKIRGFLVHFPLYFLSEQNLL
PPIGSKEAMVPMEVWT
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcaggacctagtcacagccagcacactgcaactggtggccacagacatgact
gaaatcatggagaacctcgacacacgtgagctggacatcggagagggcgaggatgagttt
gaaggaccaggagctaacagtgcagaagctcgtatcccattctctgttatctacaagatg
aagggatttaaagaaccggaagctcaagtgttcctcacgtcatttcccattactgccaaa
atcctggaggtggagcgctttgcctgtgctcaggaccgcttcaacattaccaatcagagg
agtgtgtcgaagaaacttcctgcagttttccggattgagatgagacacgggaacttcacc
tggatagtgaagcggaaggagaagcacttcatggagctgcacagagagttacggacctac
aaagccttcctgaagattcctatacccactcgcactcacacggagcggaggcagacggtc
agatacacacgacagatgcccacgttaccgcgtggcgggggagacgaactcgcgcgagag
gagcaagtgtccagccggaagcgccagctcgaggattatttaaacaagctgctgaaaatg
cctctgtacagaaactaccatgccaccatggagttcattgaagcgagtcagctgtccttc
attcatgatttgggaccaaaaggcttagagggcatggtgtataaaaggtcaggaggtcac
cggattcctggactcaactgctgcggccacagtaaagtctgttaccgctggtccaaacgt
tggttggtggtgaaagattctttcctgctctacatgaagcccgactccggcagcatctcc
ttcgtcctcctggtggataaagagttctgtgtgaaaatggactctaaagacacggagaca
aaacacggcattcgcgtggacagtttgtgcaggaacctggttctaaagttctccagtttc
cgtcacgcccgctggtggggtcaggccatcgacgactttgtgcacaaatacggcagcgcc
ttcctccaggaccatcgctttggttccttcgccaatgtgcaggagaacatcccctccaaa
tggtatgtgaacggtaaaacgtacatggaggacgtagctacagcactggaggcagctgag
gaggagatcttcatcacagactggtggctgagtccggagattttcctcaaaaggccagtt
gttgaaggaaatcgctggcgtctggactgcattcttaaacgcaaagctcaaaaaggagtt
cggatatttgttctgctctataaggaagtggagctcgcgctcgggatcaacagtgaatac
agcaagaggacgctgcaccagcttcaccccaacatcaaggtgatgcgacatcctgaccat
gtctcctcctccgtctatctgtgggctcatcatgagaagcttgtggtaatcgaccaatct
gtggcgtttgtgggtgggattgatttggcgtacgggcgctgggacgatcgagaacaccgg
ctaacggacgtggggagcgtgacgagaaccctcaacacgtctgcagagaacgtaacggaa
gcgtctctctccatggcgtctccttcaaacggtccagtacagagtaacggcaaaaactcc
ggcagggatttggaagatcagcccaagctccgaggtcatgggaaaaccaggaaaagtcgc
tttagtatcaggaaacgcctgcagagacacgggctggtgcacggcgacagtgtgagcagc
gccgagagctccgaggaaaacgcagaatcggctcaggacctgcaggccgacgtcattggt
ctgatggggaacacgcggttctggcacggcaaagattactgtaactttgtgcacaaggac
tggatccagctggacaaaccgttcgatgatttcatcgacagacacataactcccagaatg
ccatggcacgacatcgcctcggtggttcacgggaaagctgcgagagacgtcgcgaggcac
tttattcagcgctggaatttcaccaagatcatgaaaccgaagtaccggtcatacccgtac
ctcctccccaaatcccacaccaccgccaccgagatcaagcaccaggtcccgggctgcgtt
cacactaaagttcaggtgttacgatctgcgtctgattggtccgctggtataaagtaccat
gaagagtccatccacaacgcctacgtccacgtgatcgagaacagtaaacactacatctac
attgagaaccagttctttataagctgcgctgataataagctcgtctacaataagatcgga
gactccatcgctcagaggatcatcaaagcctacagggagggtacgaagtaccgtgtgtat
gtcgttactcctctcttacctggatttgaaggagacattaataccggaggaggaagtgcc
ctccaggccatcatgcacttcaactacagaacgatggttagaggagaacattctatcatg
tcgcagctgaaaaaagagatgggagatctgtggatgaactacatctcattcgggggactg
aggactcacgctgaactggagggaaaactggtgactgagttaatttatgtccacagcaaa
atgctcatcgcagacgacaacacggtcatcatcggttcggcgaacattaatgaccgcagt
atgttgggaaagcgggacagtgaagtggctgttatttacgaggacacagagactgagacg
tctgttatggacggacaggaatatcaggcaggacgtttcggactgcaactccgtctggaa
tgttttaggacgatcctcggcgctcacacagactccagcatcgatatctcagaccccatc
agtgaccatttctacaaggaggtgtggatgaccactgcagctcgcaatgccaccatctac
cagaaggtgttccgctgtttgccgtcaagtgatgtgaggacaagcctggagctggaagga
tttctgtccaagtccggtttggataaagatgatcctctgaaagctcaggaggagctccat
aaaatccgaggcttcctcgtccattttcctctctacttcctgagcgagcagaaccttctc
ccacccatcggttctaaagaggcaatggtacccatggaggtgtggacctga
DBGET
integrated database retrieval system
