Ictalurus punctatus (channel catfish): 108256397
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Entry
108256397 CDS
T04658
Name
(RefSeq) meckelin
KO
K19348
meckelin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108256397
Cilium and associated proteins [BR:
ipu03037
]
Primary cilia and associated proteins
MKS complex
108256397
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Paralog
GFIT
Motif
Pfam:
Meckelin
Motif
Other DBs
NCBI-GeneID:
108256397
NCBI-ProteinID:
XP_017308711
Ensembl:
ENSIPUG00000019734
UniProt:
A0A2D0PTH0
LinkDB
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Position
23:13793881..13834347
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AA seq
984 aa
AA seq
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MATGTLKLPELIHGYFFVFLLNSNPIYCQQFSISSSQPSDCGVQNYFDISSLTCMKCGPN
QVSSTSGLSCECQTGFKVLSSNGGFITCQKCTDTKPAVTRDGYECIRCPGGLGEDGKCKC
PEDSVLVERNADGTPLEEALCELCNGTDPAFSSPDMKGNRCVRCQDSFINTSQSCTCGSN
ILAGGMCFPPNTLPPMVVSTVNFAQLGLSVTSAWFSRFLYSSAAACLLFTNRTACQALGN
MCVMNMHSTTISTDACGLYYTIYRATAAQGNNQDNPYWRINLPWLYYGEQPGLASRVLQT
EPLPVGFSFKGTNKNTNIQLRAAVYTVRGEFIRWENVGRSNLQLCPDTLTRQQAAFTFGT
AYNQNCVLSVSDLLAAYSEPLFYDIFLVQQNTAGDERLLAVPILNLILQFSGQFVNQASN
MNSWYLTRRLMMIDTLSGREKSVNSTPRVIRVASNLKMSFQLVPNTQKGQVYPPLMTVSY
SDILITDQAKQTVAISFSLEYEMDQNEARVKTDIALGVLGGVAVVYTLLKTASWKRRIAS
PLIDIQTILKFLLFYAGDLANVFFFITVGTGLYWLILYKAQQFVSVLLPLPAQEDSFVIY
VGCAFALKAVQFLHELWLQMSVDIFFIDWERPRGGKSNKSVEGCGEGKTPAPTVSIWRTY
FVANEWNEIQTIRKINPTFQIISVLFFLEVVSFSSLALRDPSSELQRSDEGYIPAYSRIL
RYGVATAVWLCIGFIQIIFFSVFYERFVEDKIRQFVDLCSISNVSVLLLSLRCFGYYIHG
RSVHGHADTNMDEMNSNLKREAENLCGQRGLIPNSDIQTFQISITSRLRAQYDRIFEPLS
RRNGPSRLIDASANPFEQNTKAYHTMNRFLASFIDHAHRDMDYIVKDKLFFERVIGMEFI
EPLDKSIFYNDDSHSFAEVLFYGNEATLLIFDTLFFSVVDLCSQNFILAAVLTYVQQMIF
RLIRNVSGRRNLARKTLVDKRFLI
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggggacgctaaagttacccgagctgattcacggatactttttcgttttcctg
ttaaattcaaacccgatttattgccaacagttttctatttcttcttcgcaaccgtcggat
tgtggggtccaaaattattttgatatttcaagcttgacttgtatgaaatgtggaccgaac
caagtcagcagtacatcaggtttgagctgtgagtgtcagacgggtttcaaggtcctgagc
agcaacggaggattcattacctgccaaaagtgcacagacaccaaaccggctgttacgcgg
gatggatatgaatgtatcagatgtccaggcggactgggggaggatgggaaatgcaagtgt
cctgaagacagtgttcttgtggaaagaaatgcagatggaacccctctcgaagaagcccta
tgtgagttgtgtaatggaacagatccagctttttcttccccagacatgaaaggcaacaga
tgtgtgagatgtcaggactccttcatcaacacatctcagtcctgcacatgtggctctaac
attctggctggaggaatgtgtttccctcccaacaccctgccccctatggtcgtttccaca
gtcaactttgctcagttgggcctgtctgttacttctgcctggttctctcgcttcctgtat
tcgtctgcagctgcatgtctgttgttcactaatcggacagcatgccaggctctggggaac
atgtgtgtgatgaacatgcactcaaccactatcagcaccgatgcctgcggcctgtactac
actatctacagagcaacagcggctcagggcaacaaccaggacaacccatactggaggatt
aacctgccctggttgtattatggagaacagccaggattggcatcaagagttctgcagaca
gaaccactacctgtaggcttcagctttaaaggcacaaacaagaacacaaacatacagctg
cgggctgcagtgtacaccgttcgaggagagtttataagatgggagaatgtaggcagaagc
aacctgcagctttgtccagataccttaactagacagcaggctgctttcacatttgggacg
gcctacaatcaaaactgtgtcctctcagtgtcggatctcctggctgcttattcggagcct
ctgttttatgacatcttcctggtgcagcagaacactgcaggagatgagcgcctcctcgct
gtgcccattctcaacctcattctgcagttcagtggccagtttgtcaaccaagcctctaac
atgaatagctggtacctgacccgaaggctgatgatgatagacactttaagtggcagagaa
aagagtgtgaattccacccccagagttattcgtgtggccagtaacttgaaaatgagtttc
cagcttgtgccaaacacccagaaaggtcaggtgtaccctcctctgatgactgtgtcctac
tctgatattctcatcactgaccaggccaagcaaactgtagctatatcattctctttggag
tatgagatggatcagaacgaagctcgagttaaaactgatattgctctgggtgtgttgggt
ggagtggctgttgtgtacactctattaaagacggcaagctggaaaagaaggattgcctcc
cctctcattgacatacagaccattttgaagttcctgctgttctatgctggagatttggca
aatgttttcttcttcatcaccgtgggaactggtctgtactggctcattttatataaggct
cagcaatttgtgtctgtattgttgccattaccagctcaagaggacagttttgtgatatat
gttggatgtgcttttgcacttaaggcggtgcagttccttcatgagttgtggttgcagatg
tcagtggatatattctttatagactgggagagacctcgtggtggcaagtccaataaatct
gtagaagggtgtggtgaaggaaagaccccagcacctacagtcagcatctggagaacgtac
tttgtggctaatgaatggaatgagatccagaccatccgtaagatcaaccccaccttccag
atcatctctgtgctcttcttcctggaggtggtgagtttctccagccttgcattgagagac
ccttcttcggagcttcagcgctcagacgagggatacatacccgcctacagccgcatactg
cgctacggtgtggcaactgctgtgtggctttgcattggttttatacagatcatctttttc
tcagttttctatgagcgctttgtggaagacaagattcgccagtttgtggatctctgttcc
atcagtaatgtatcagtcctgctgctttctctacgctgttttggctactacatccacggc
cgatctgtgcacggccatgccgacactaatatggacgagatgaactcaaacctcaagaga
gaggccgagaatctttgtggccagagaggactaatacctaattctgacattcagactttt
cagatctccataacaagccgtctgagggcgcagtatgatcgcatattcgagccactcagt
agaagaaatgggccctcgcgattgatcgatgcctcggccaacccgttcgagcagaacaca
aaagcctatcacaccatgaaccgatttctcgcctcttttattgaccacgctcatcgtgac
atggattacattgtgaaagataagctgttctttgaaagagtcattggaatggagttcatt
gaacctctggacaaaagcattttttataatgatgactctcactccttcgctgaggtgctt
ttctatgggaacgaggcgacgctgttgatctttgacacactctttttctctgttgttgat
ctctgcagccagaactttattctggcagctgtactaacatatgtacagcaaatgatcttc
aggctgattcgaaatgtctccggtcgcaggaacctggccagaaaaactctggttgacaaa
agattcctcatctaa
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