Ictalurus punctatus (channel catfish): 108256433
Help
Entry
108256433 CDS
T04658
Name
(RefSeq) brother of CDO isoform X1
KO
K20020
brother of CDO
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108256433
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108256433
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
Other
108256433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Ig_VEGFR-1-like_5th
Fn3_ROS1
Ig_5
Ig_4
Ig_SEMA-3_4_7A
BiPBP_C
Fn3_VIN3
Ig_PDGFR_d4
G6B
Fn3_PBP1
Motif
Other DBs
NCBI-GeneID:
108256433
NCBI-ProteinID:
XP_017308790
Ensembl:
ENSIPUG00000009964
UniProt:
A0A2D0PUK8
LinkDB
All DBs
Position
23:complement(4859927..4888153)
Genome browser
AA seq
1037 aa
AA seq
DB search
MLSSRKRGIWKMSRMADRISWHGRLQVLCALCSALLCCLQAASPLSDDDVPVFTEEPLSV
VQKLGGSVTLRCSARPAQARISWRLNGRELFADGDEAELGVATQPDALFIPSLSNGTLGR
YQCVASTGAGARASMPANVTAAKLRDFEPDDQQEIEVDEGNTAVIECHLPESQPQAQVRY
SVKQEWLETSKGNYLIMPSGNLQIANATQEDEGPYKCAAYNPVTQEIKTSSSTDRLRIRR
STSEAARIIYPPASRTMTVRKGHRLVLECVASGTPTPQVTWAKDGRELSPQNNTRFLLSN
LLIDAVSERDSGTYACHAHNGMGSPGTATVLYDVQVIEPPQVRVELLQQEPAWGDTVRFS
CQVRGNPAPSVVWLHNAQPITPSSRHRLSSHVLRVYGVGPQDDGVYQCMAENWVGGAQAA
TRLLTVPAAPSRPGRLPLIRPLSPDQVLRELPPARPMPPSTELLIDCSEIPGNVSPAEAP
VILSQPRTGTADYYELVWEPRHDGGAPVLEYVVKYRKAGETLGEWTIKNISGLEHKLILA
KLQPASLYEVEMAARNCAGLGQPAMMTFRTGKGRKSAVGTIDRPKTPVSPPRLSPPEAPD
RPTVTTASETSAYVTWIPRGNRGFPIQCFRVEFKKLRKDGGAGGEWEVAEDNISPSRLSV
QIKGLEKGTSYKFRVLAVNVLGASPPSAPSKAYTVMGSNQTNPRPVDGPYITYSEAINET
TIILKWTYTPLNNTPIYGFYIYYRPTDSDNDSDYKRDVVEGDRYWHAITGLQPETAYDIK
MQCFNEGGVSEFGNVVILETKARPNQKHTTPETSSHLPDSGGPVPRPSDLPYLIVGVVVL
GALVFIIVAFVPFCLWRAWAKQKQTADMCFPAVSAPLSSCQYTMVPMQGMALVGHCPVDS
HLTPSHTVYASKGEYTANGKHHTLRLPGLCQEDADCEMENGTFLPQRLSNGHAHAYHYTV
GVPGHVEEDGCCEPDDSTVELLSPDHLEHVQENHATQCLADLSLLPASEAVGMTTSQQEV
VKIQREIQLEERVLHDG
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaagtcgaaaacgtggtatatggaagatgtcgagaatggcggaccggatatcg
tggcacgggaggcttcaggtgctttgtgcactgtgctcagctcttctgtgctgcctgcag
gctgcttctcctctcagtgacgacgacgtcccggtgttcacggaggagccactgtccgtg
gtgcagaaactggggggcagcgtgacgctgcgatgcagtgcccgacccgctcaggcccga
atcagctggcgtctgaacggccgcgagctcttcgccgatggcgacgaggcggagctgggc
gtggcgacgcagccagacgcgctctttatcccctccctctctaacggtacgctcgggcga
taccagtgtgtggccagcaccggcgccggagcgcgagccagcatgcctgctaacgtcacc
gcagccaagctgcgagactttgagcctgatgatcagcaggagattgaggtggacgaaggg
aacacagcggtgattgagtgtcacttgcccgagagccagccccaggcgcaggtccgctac
agtgtcaagcaggagtggcttgaaacatctaaagggaattacctcatcatgccatcgggg
aacctgcagatcgccaatgccacgcaggaggatgaagggccttacaaatgtgctgcctac
aatccagtcacccaagagatcaaaacctccagttctacggaccgcctgcgcatacgccgc
tcgacgtccgaggcagcgaggatcatctacccgccagcgtcccgcaccatgacggtgcgt
aaaggccacaggctggttctggagtgtgtagccagcggcaccccgacccctcaggtcacc
tgggcgaaagacggtcgagaactaagccctcaaaacaacactcgcttcctgctcagcaac
ctgctgatcgacgccgtgagcgagagagactcgggcacgtacgcctgccacgcccacaat
ggcatgggctctcctgggacggcaaccgttctctatgacgtccaagtgatcgagccccct
caggtgcgggtggagctgctgcagcaggagccagcatggggcgacacagtgaggttcagc
tgtcaggttcggggaaatccggcccccagcgtggtttggctccataacgcacaaccaatc
actccatcatcacgtcaccgcctctcctcacacgtgctgcgtgtctacggcgtgggcccg
caggatgacggagtctaccagtgcatggctgagaactgggtgggcggagcccaggccgcc
acacgactactcactgtgcctgctgcaccctcgcggccgggtcgactgcccctcattcgg
ccactgagccctgaccaagttttgcgagagctgcctcctgctcggcccatgccacccagc
acggagcttctcatcgactgctcagagatccccgggaacgtgtcaccggctgaggctccg
gtcatcctgagccagccccgcacaggcacggcagactactacgagctcgtctgggagcca
cggcacgacggcggggcgcccgtactggaatacgtcgtcaagtacagaaaggctggcgaa
actctcggcgagtggaccataaagaacatatcaggtttggagcacaagctgattctagcc
aaactgcagccggccagcctgtatgaagtcgagatggcagcgaggaactgtgccgggctg
ggtcagcctgccatgatgaccttcagaactggtaaaggacgcaagagtgcggttggaaca
atagaccgacccaaaacgccagtgtcgccaccacgtctgtctccccctgaagctccagac
aggccgacggtaaccacggcatcagagacttcagcttacgtgacgtggatcccccgtggg
aaccggggcttccccatccagtgctttcgagtggagtttaagaaactgaggaaggacgga
ggagctgggggcgagtgggaagtagcggaggacaacatctctccatcacgcctctctgta
cagatcaaaggcctggagaaagggacctcgtataagttccgagttttggcggtgaacgtg
ttgggagcaagtcctccgagtgcaccctccaaggcctacacagtgatgggcagcaaccag
accaacccccggcccgtcgacgggccctacatcacctactctgaagccatcaatgagacc
accatcatccttaagtggacttacacacccttgaataacactcccatctatggcttctac
atctattaccgacccactgacagtgataatgacagtgactataagagagatgtcgtggag
ggagaccgatactggcacgccattaccggcctgcagccggaaacagcgtacgacattaag
atgcagtgttttaacgagggaggtgtgagcgagtttggaaatgtggtcatcttagaaacg
aaagcccgacccaatcagaagcacacgacaccagagacttcgtcccacctaccagactcg
ggaggccctgtgccacgccccagtgatttaccgtacctcatagtgggagtggtggtgctg
ggggccctcgttttcatcatcgtagcctttgttccattttgtctgtggagagcctgggct
aaacagaagcaaacggcagacatgtgctttccagctgtttctgcaccgctgtcgtcctgc
cagtacaccatggtgccgatgcaaggcatggctttagtagggcactgccctgtagactct
cacctgacccccagccacactgtgtatgcatccaaaggagagtacaccgccaacgggaaa
catcacacgctccgccttcctggactgtgccaggaggatgcagattgtgaaatggaaaat
ggcacatttttgcctcaaagactctccaatggacatgcccatgcttatcactacaccgtg
ggcgttcccggtcacgtggaagaggatggctgctgcgagccagacgactctaccgtggag
ctcctgagccccgatcatcttgaacacgtccaggagaaccacgctacccagtgtttagca
gacttgtcactgttaccagcatcagaggctgtcggcatgacgacgtcacaacaggaagtt
gtcaagatccagcgtgaaatccagctagaggagcgagtactacatgatggatga
DBGET
integrated database retrieval system