Ictalurus punctatus (channel catfish): 108256474
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Entry
108256474 CDS
T04658
Name
(RefSeq) patched domain-containing protein 3
KO
K24682
patched domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108256474
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Other domain-containing proteins
Patched domain-containing proteins
108256474
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
108256474
NCBI-ProteinID:
XP_047014558
Ensembl:
ENSIPUG00000002464
UniProt:
A0A979F2Z1
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All DBs
Position
1:complement(35118905..35127487)
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AA seq
881 aa
AA seq
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MPRFRTDCIEKPFSRLFEKLGHVVGSSPEWFIIVPLLMSLAFGGGLLFLAELEDNDIENQ
FTPINGSSKEARLFVMKNFPINDSMFSSQRLYAEGKYAITVLSTENGDNILTESPFEEVV
RINNVVTGLLVKVGQTDVGFKDLCTTVDGECVSNAIIDISENNADKIGQMNITFPTYAFR
GGLIFLGSELGGVETSGNTIQKAQAIRLFYFLKNISGSNDWLREFHHVLHAEANNKKVKI
SHFTSLSRQEEVQKHTTDGLPFFSITYVLAILFSIISCMRLDNVRNRLWVAFVGVLSAGL
AVISSFGLLLYAGVPFVITVANSPFLILGIGVDDMFIMLANWQQTDVRDSVAKRMADTYK
EAAMSITITTLTNVLGFYIGLTSDFASVRVFCLYTSTAIIFCFLYNITFFGGFLALNGRR
EAGNRHWLTCLRIPLESPAGRSKAYALCCTGGDFDRQTGTEKEQPVNHFFKKYYGPILTK
TPTKVCVIFLYLGYLAAGIYGCFLLEQGIEMKHLAADDSYVIMFYDDEKKYFSSYGPNVM
VVVTEEFPYWDQCRRSELGRCMEDFNKLSFVDKDLYTSWLDSYVTFTQTTGQDVNNETVF
KTNLPNFFNRVPEFGQDVNIVNGTIVASRFFVQTINIVNAAMEITMFNELRNTAEYCRAA
NLLVFHPMFIYLDQYTVIVSSTVQNVAVTAAVMLVISLILIPNPLCSLWVTFSIGSVITG
VSGFMALWSVNLDSISMIILVVCIGFTVDFSAHISYSFVSSKQETANERAIDALFCLGYP
ILQGALSTIIGVLVLAGSKNHIFRTFFKIMFLVMVFGLLHGIVFIPVFLTCFSCVSNKRP
DDRKTCDEESSGRSTETRQTQIYVTQNSNRWSGGTWDPDCP
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctttcggaccgactgcatcgagaagcctttctccaggctctttgagaagctc
gggcatgtggtgggttcttctcctgagtggttcatcatcgttcctcttctcatgtccttg
gcgttcggcggaggcctgctttttctcgccgagctcgaggataatgacatagagaaccag
ttcacacccatcaacggatcgtcgaaggaagccaggcttttcgtgatgaagaatttccca
attaacgactccatgttctcaagccaaagactctacgccgaagggaagtacgcaataacc
gtcctgtctactgaaaacggagacaacattctcacagagagtcctttcgaagaagtcgtt
cgtattaacaacgtagtgaccggtcttctggtgaaggtcggacagacagacgtaggcttc
aaggatctgtgcaccaccgtggatggagagtgcgtcagcaacgccataatagacatctct
gaaaacaacgcagacaaaatcggacagatgaatataacgtttccaacgtacgctttcaga
ggcggtctcatcttcctcggctctgaactcggtggtgtggaaacatctggaaatacgatt
cagaaggcccaagcgatcagacttttctactttctgaaaaatatctccggttccaacgac
tggctgagagaattccatcacgtccttcatgccgaagcaaacaacaagaaagtcaagata
tctcactttacctcactgtccaggcaggaggaggtgcagaaacacactaccgatggcctc
ccgtttttctccatcacctacgtccttgcaatcctgttctccataatatcgtgtatgcga
ctggacaacgtgaggaacaggctgtgggtggcgtttgtgggtgtcctttctgccggactg
gccgtcatcagcagttttggcctgttgctgtatgccggagtgccgttcgtcataaccgtg
gctaactcgcctttcttaattctgggcatcggtgttgacgatatgttcatcatgctggcc
aactggcagcagaccgacgtcagagacagtgttgcgaagcgaatggcagacacttataaa
gaagccgccatgtccattaccatcacgacgctcaccaacgtgctgggcttctacatcggc
ctcacgagcgacttcgcgtccgtccgggtcttctgcctgtacaccagcacggccattata
ttctgtttcctgtacaacatcaccttcttcggaggctttctggccctcaacgggaggcga
gaagcagggaaccgacactggctgacctgcttgaggatcccactcgagagtccggcgggt
agatccaaggcttacgccctctgctgcacaggaggagactttgaccggcagactggcact
gagaaagagcagccggttaatcatttcttcaaaaagtactacggccccattcttaccaag
acaccgaccaaggtgtgtgtgatattcctgtatcttgggtatctcgctgctgggatttac
ggatgcttccttttggaacaggggatcgaaatgaaacatctagcagcagacgactcctac
gtaatcatgttctatgacgacgagaagaagtacttttccagttacggcccaaacgtcatg
gtggtagtgactgaggagtttccctactgggaccagtgcagaagatctgagctagggcgc
tgtatggaagacttcaacaagctcagttttgtcgacaaggatctgtatacctcttggctt
gactcttatgtgacgtttactcaaaccacgggacaagacgtaaacaacgagactgttttt
aaaaccaacctgccaaacttcttcaaccgcgtccctgagttcgggcaagacgtgaacatc
gtgaacggcacaatcgttgcctctcgtttttttgtgcagactataaacatcgtcaacgct
gctatggagataacgatgtttaacgagcttagaaacacagcggaatactgtagagcagca
aatctactggtgtttcatcccatgttcatctacttagaccaatacaccgtgatagtgagc
agcactgttcagaacgtggccgtcaccgcagcggtcatgctggtcatctcgcttatcctg
atccccaaccctctgtgctctctctgggtcacgttctccatcggctcggtcatcaccggg
gtctctggcttcatggcgttatggagcgtcaatctcgactccatttccatgatcattctg
gtcgtgtgtattggtttcactgttgacttttcagcccatatttcctactccttcgtctcg
agcaagcaagaaaccgccaacgagcgtgctatcgacgccctgttttgtttgggctatcct
atactgcaaggcgctttgtccaccataataggcgtcttggtgttagccggctccaagaac
cacatctttcgaaccttctttaaaatcatgtttctcgtcatggtgtttggtttgctgcac
ggcattgtgttcatcccggtgttcctcacgtgtttctcctgcgtctcgaacaaacgtcct
gacgatcgcaagacgtgcgacgaggaaagctcgggacggagtacggagacacggcagact
caaatatatgtcactcaaaattctaaccgatggtcaggaggaacatgggaccctgactgt
ccgtga
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