Ictalurus punctatus (channel catfish): 108256530
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Entry
108256530 CDS
T04658
Symbol
abcb4
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X2
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108256530 (abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108256530 (abcb4)
04147 Exosome [BR:
ipu04147
]
108256530 (abcb4)
04090 CD molecules [BR:
ipu04090
]
108256530 (abcb4)
Enzymes [BR:
ipu01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108256530 (abcb4)
Transporters [BR:
ipu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108256530 (abcb4)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108256530 (abcb4)
CD molecules [BR:
ipu04090
]
Proteins
108256530 (abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
ABC_ATPase
AAA_22
RsgA_GTPase
Rad17
AAA_16
AAA_5
G-alpha
AAA_30
AAA_15
PRK
SbcC_Walker_B
AAA_29
AAA_24
AAA_7
AAA_19
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
108256530
NCBI-ProteinID:
XP_017308977
Ensembl:
ENSIPUG00000022776
UniProt:
A0A2D0PSI6
LinkDB
All DBs
Position
23:15858240..15876802
Genome browser
AA seq
1340 aa
AA seq
DB search
MTSSPMQLKSLARTVRVPPLHARRPEVSARAPKRSNRAQFNIITEQQAASDKQTDTMGKK
YDLKTEERQESPNGDLSGEKKGKKEKKPAPEPMVGVFEIFRFADSVDILLMLVGTIMAIA
NGAVLPAMVIVFGEMTNSFVDNSILEGLHPNFTLNPNFTYQFSNQTLGEQMTRHAIYYSI
MGGIVLFAAYMQVAFWTLAAGRQVKRLRTIFFHSILKQDIGWFDVNETGQLSTRLADDIF
KINEGIADKLGTLIQSLSTFLTGFIIGFIKGWKLTLVIIAISPLLGISAAVITKVMTSFT
SREQTAYAKAGAVAEEVLSAIRTVFAFGGQKKEMKRYQKNLEDAKNVGIKKAITVNIAVG
FTYFMIYVSYALAFWYGSTLIFAGEYDVGTLLTVFFAVVIGAFGLGQTSPNIQSFSSARG
AAHKVFNIIDHKPSINSFSDEGYKPDVVKGNIEFKDIHFSYPSRQDVKVLNGMNLKISSG
QTIALVGSSGCGKSTTVQLIQRFYDPQEGSVSIDGHDIRTLHVRSLREMIGVVSQEPVLF
ATTIAENIRYGRQDVTQEEIEQATREANAYDFIMKLPDKFETLVGDRGTQMSGGQKQRIA
IARALVRNPRILLLDEATSALDTESEAIVQAALDKVRLGRTTIIVAHRLSTIRNADVIAG
FQNGNIVELGTHDELMQKKGVYHSLVTMQTFNSTDATEEFKAEEVGLDEKSPSASSMTEH
TLYRQKSKSFIGSEKGQENAHKDSVQEEKVPEVSFFKVLSLNKAEWPYMVVGIFCAIING
GLQPAFAIIFSKIVAVFAEPDENVRRERANLFSLLFAVIGVVSFIALFLQGFCFGKAGEI
LTMKLRSRAFKSMMRQDLGWYDNPKNSVGALTTRLATDTAQVQGATGLRLATLAQNVANL
GTAIIISFVYGWQLTLLILSIVPAIAVAGAIQMKLLGGHATKDKKELEQAGKIATEAIEN
IRTVVSLTRERKFENIYQENLILPYKNAQKKAHIFGFTFSFSQAMIYFAYAGCFKFGAWL
IEQKMMTFEGVFLVISAIIYGAMAMGEANSFTPNYAKAKMSASHILMLIDRVPDIDNNSE
EGEKPDHFEGNVRFQDVKFRYPSRPDVPVLQGLRLRVKKGQTLALVGSSGCGKSTTIQLL
ERFYDPVQGTVMLDNNDTKQLNIHWLRSQIGIVSQEPVLFDCSLAENIAYGDNSRQVTQE
EIEQAAKAANIHSFIEGLPQKYQTHAGDKGTQLSGGQKQRIAIARAILRNPKLLLLDEAT
SALDTESEKIVQEALDKAREGRTCIIVAHRLSTIQNADVIAVFQNGVVVEEGTHKQLLNQ
QGVYYTLINSQMGYSKQATT
NT seq
4023 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcatcgccaatgcaattaaaatctctcgcccgcactgtgcgcgtgccaccactc
cacgctcgcagacctgaagtcagcgctagagctccgaaaagaagcaacagagctcaattt
aacatcattactgaacaacaagcggcttcagacaaacaaacagacaccatgggcaaaaag
tacgacctaaagacggaggaaagacaagaaagtccaaatggagacctaagtggagaaaaa
aagggaaagaaagaaaagaaacctgccccagaaccaatggtgggagtgtttgaaatattt
cgctttgctgacagcgtggacattcttctgatgttggttggaaccattatggctatagcc
aatggagcagtgcttcctgctatggtgattgtatttggagaaatgacaaacagctttgtg
gacaacagtatattagagggcctgcatccaaactttactttaaacccgaacttcacctat
caattttccaatcaaacactcggagaacagatgacaaggcatgccatttactacagcatc
atgggaggtatagtcctttttgcagcctacatgcaggtggccttctggaccctggctgca
gggcgacaagtgaagaggctccgaacgatcttctttcactccatcctcaaacaggacatt
ggttggtttgatgtcaacgagacaggacagctcagtacacgtctcgcagatgacatcttt
aagataaatgaaggcattgcagacaagttgggcacattaattcagtccctctccaccttt
ttaacgggcttcatcattggctttatcaaaggctggaaactcaccctggtcataatcgct
ataagccccctgttaggcatctcggccgccgtcattaccaaggtaatgacctcgttcacc
tcgagggagcagacggcatatgcgaaggctggagctgtagctgaagaggtgctgtctgcc
atcagaactgtctttgcctttggaggacagaagaaggaaatgaagaggtatcagaaaaac
ctggaagatgccaagaatgttggtataaagaaagctattacagtaaatatcgctgtggga
ttcacatacttcatgatctatgtgtcctacgcgctggccttctggtatggcagcacattg
attttcgctggagagtatgacgtaggaacacttctgacagttttttttgctgtcgtaatt
ggagcattcggccttggccagacctctcctaacattcagtcgttttctagtgcacgaggg
gctgctcacaaggtttttaacatcatcgatcataaacccagcatcaacagtttctcagat
gaaggttacaaacctgatgtggtcaaaggaaacatcgagttcaaagacattcacttcagc
tacccctcgcggcaggacgttaaagtcctaaatggcatgaatctgaagatcagcagtgga
cagactattgctctcgtaggtagcagcggttgtggtaaaagtacaacagtccaactgatt
cagcgcttctacgacccccaagaaggatcagtgagtatcgatggccatgacattcgcact
ctgcatgtgcgcagtctgagggagatgatcggcgttgtgagtcaggagcccgtacttttt
gccaccacaatcgccgagaacattcgatacggccgtcaggatgtgacacaggaggagata
gagcaggccacacgggaggccaatgcctatgatttcatcatgaaacttcctgacaaattt
gagactctggtgggtgacagaggcactcaaatgagcggaggacagaaacagcgaattgcc
atcgcccgagctcttgtgcgcaatcccagaatccttctgctggatgaggcaacatccgct
ctcgacactgaaagtgaggcgattgtacaagcagccctggataaggtgagacttggcagg
acgaccatcatagtggcgcaccgtttgtccactatccgcaatgctgatgtcatcgctgga
ttccagaacgggaacatcgtagagcttggcacacacgacgaactgatgcagaaaaaggga
gtctaccactcactggtcactatgcagacgtttaacagcacagatgccacagaagagttt
aaagcagaggaggtagggctggatgagaagagcccctctgcctcctctatgacggaacac
acactctacagacagaaatccaagagtttcattggctcagagaaaggccaggaaaatgca
cacaaagattcagtacaggaggaaaaggtcccagaagtgtcattcttcaaagtactgagt
ctgaataaggcagaatggccctacatggtggtgggcatcttctgtgcgatcatcaatgga
ggcctgcagccggcttttgctattatcttctccaaaattgttgctgtgtttgctgagcct
gatgagaacgttcgaagggaaagggcgaatctcttctcattgctgtttgctgtcattggg
gtcgtttctttcatcgctcttttcttacagggtttctgttttggtaaagctggcgagatt
ctgaccatgaaactgaggtccagagcctttaaatccatgatgagacaggacctaggttgg
tatgataatcctaagaatagtgtgggagcactgaccaccagactggccacagacactgct
caagtgcagggggcaacagggttgagactggccacattggctcagaatgtggcaaacctt
ggcactgcaatcatcatttcgtttgtgtacggctggcagctcaccctcctcatcctctcc
attgtgccagctattgccgtagcaggggctatccagatgaagttgttaggaggccatgcc
acaaaggacaagaaggagttagagcaagctggaaagattgccactgaagccatagaaaat
atccgcacagtcgtatcactgaccagagagaggaagtttgagaacatttaccaggagaac
ctgattttaccatacaagaacgctcagaagaaggcacatatctttggctttacattctct
ttctcccaagccatgatctactttgcctatgcgggctgcttcaagttcggtgcatggctc
attgagcagaaaatgatgacatttgagggagtttttcttgtaatctcagctataatatat
ggagccatggcaatgggagaagccaactcatttactccaaactacgccaaggctaagatg
tcagcctcgcatatcctaatgctaatcgatcgagtgccagatatcgacaacaactcagag
gagggagaaaagccggatcacttcgaagggaatgtgcgctttcaggatgtgaaatttaga
tacccgtcgcggccagacgtgcctgtattgcagggcctgcggctccgggtgaagaaaggt
cagacgctcgctctggtgggtagcagcggctgtggcaagagcaccactattcagctgcta
gagagattttacgatccagtacaaggcacagtgatgctggataataacgacaccaaacag
ctaaacatccactggctacggtctcagattggtattgtatcccaagagcccgtgctattt
gactgcagcctggccgagaacatcgcatacggagataacagcaggcaggtcactcaggag
gagatcgaacaagctgccaaggctgccaatatacactctttcatagaggggcttcctcag
aaataccagactcatgcaggtgataaaggcactcagctgtcaggtggacagaagcagcgt
atcgccatcgctagagctatcctgcgcaaccccaagctgctgctcctggacgaggccaca
tcggcgcttgacacagaaagtgaaaagatcgtacaggaagccttggataaggctcgcgag
ggtcgtacctgcatcatagtggctcaccggctgtccaccatccagaacgctgatgtcatc
gccgtgtttcagaacggtgtggtggtggaggagggcacgcacaaacagcttctcaaccag
cagggggtttattacaccctcatcaattcccaaatgggttacagcaaacaggcaacaact
tga
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