Ictalurus punctatus (channel catfish): 108256533
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Entry
108256533 CDS
T04658
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108256533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108256533
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
108256533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_25
AAA_18
TIP49
AAA_14
Viral_helicase1
AAA_24
ATPase_2
NACHT
NPHP3_N
AAA_28
AAA_5
TsaE
ABC_tran
RNA_helicase
AAA_17
RuvB_N
bpMoxR
AAA_33
Cytidylate_kin
AAA_30
DUF815
AAA_11
IstB_IS21
AAA_7
SLFN-g3_helicase
Mg_chelatase
NB-ARC
AAA_19
Rad17
PduV-EutP
AAA_3
NTPase_1
nSTAND1
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
108256533
NCBI-ProteinID:
XP_017308983
Ensembl:
ENSIPUG00000023000
UniProt:
A0A2D0PQX8
LinkDB
All DBs
Position
23:complement(16102152..16113307)
Genome browser
AA seq
447 aa
AA seq
DB search
MTAPYNAESLPTVYRMNGEKMEVGWVHHQQPCENGVADRVEVHIEVHVKSQSTARRTEVR
THVLALLDRHSLVIGSFKWTEFDDDFLTKNVESVSVVDVDAQPLDLKTSNLCVHIFSLND
DGPSTLTLEEEEELSAANHWLLPAAEFHGIWESLVYEEGIKTQLLDYVSTAIFFSDKNVD
SNLVAWNRVVLLHGPPGTGKTSLCKALAQKLSIRLSGRYSYGQFVEINSHSLFSKWFSES
GKLVTKMFQKIQELIDEKEALVFVLIDEVESLTAARNASQAGTEPSDAIRVVNSVLTQLD
QIKRHSNVVILTTSNVTEKIDLAFVDRADIKQYIGLPSARAIFNIYLSCLEELMKRQIIY
PRQQLLNLEELDTLDYIKSEVTGLSLHLQKIAERSVGLSGRTLRKIPFLAHALYAKKSVL
TVESFLNAMDNAVAHQIKEREKLVNCI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacagccccatacaatgctgaaagtcttcctactgtttacaggatgaatggggagaaa
atggaggtgggttgggttcaccatcagcagccctgcgagaacggcgttgctgaccgagtc
gaagtacacatcgaggttcatgtcaaatctcagagcacggcgagacgaactgaagtaagg
acacacgttttggctctgctcgaccgacacagcctcgtaatcggctccttcaagtggacg
gagtttgatgatgacttcctgacgaaaaacgtcgagtctgtctccgtggtggacgtcgat
gcacagcctcttgatttgaagacgagcaatctgtgtgttcacatcttctctctcaacgac
gatggaccgagcactctcaccctggaagaggaggaggagctatctgcagccaatcactgg
ctcctgccagcagctgagtttcatgggatctgggagagcctggtttatgaggaaggaatc
aaaacgcaactcttggattatgtttcgacagcaatcttcttctctgacaaaaacgttgac
agcaatctggttgcttggaatcgtgttgtgttgcttcacggacctccgggcacaggaaag
acttcactgtgtaaagcacttgcacagaaactctccatcagactctctggaagatattcc
tatggacaatttgtagaaatcaacagccacagtttgttctcgaaatggttttcagagagc
gggaaactcgttacgaagatgtttcagaagattcaagagctgatagatgagaaagaagcc
cttgtttttgtgcttattgatgaggtggagagtctaacggcagcgagaaacgcctctcag
gctggaaccgaaccttctgatgccatccgagtggtcaactctgtccttacacagctggac
cagatcaaacgacattcgaacgtggtgatcctcactacttcaaacgtaacggagaagatc
gacctggccttcgtggacagagcggatataaagcagtatatcggcctgccgagcgcccga
gccatcttcaacatctacctgtcctgtctggaggagctcatgaagcggcaaatcatttac
ccacggcagcagctgctgaacctcgaggagctcgatacgttggactatatcaagagcgaa
gtgaccgggctcagtctgcatctgcagaaaatcgcagagaggagcgtaggtcttagtgga
cgcaccttgaggaaaattccctttttggctcatgcactttacgcgaagaagtctgtgttg
acggtcgagagctttctgaacgccatggacaatgctgtggctcatcagataaaggaacgg
gagaagctggttaactgtatatga
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