Ictalurus punctatus (channel catfish): 108256540
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Entry
108256540 CDS
T04658
Name
(RefSeq) myomesin-3
KO
K24495
myomesin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108256540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108256540
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108256540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
ig
Ig_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set
C2-set_2
fn3_2
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
108256540
NCBI-ProteinID:
XP_017309001
Ensembl:
ENSIPUG00000023143
UniProt:
A0A2D0PUA1
LinkDB
All DBs
Position
23:complement(16292399..16348046)
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AA seq
1426 aa
AA seq
DB search
MAAKMVTYRCQEEEKGQMSHSMELSSQIKKKKFKSSDEEASLSEFYPIIPGDIMSVKEIL
TEPKFPRHRTWEVLRETMDNDELRERDQWTMFGNEAEKVEIEVIRNQHMVRRRMDRMALR
KEAERKISTHLKFLDDLSMKTPDFSIPLRPHTLWEGMAVKLSCTVEGCPLPHVTWYKDGV
PLTASSQPWNYKLLQKYGLNTLEIRRCSVADTGEYKVVAKSSLGEATTYATVVVNSKRRL
EAGMKHTQAVGPVTEEEALFDTTFPPSFILEGGTLTLSCHFTFPLLPFQQDVAWFRDGVP
LRTSGRLGIHTALRSSTLSLKGMHKEHEGLYTVRLRTRDGITEHSAYVYVKDGPAAVRGA
PGSPLHLGCSDVNRDYVFLSWEPPSAEGVSPVQGYFIERCEMGTGKWERCNELVQMLCHY
PVMGLKENTMYQFRVCAVNQAGVGRPSKLSDPIVTSDPMEPSRTMVVKVDRGREIVITKD
QLESQIRVPFSPTDVRVCELSDTYVVMCWTEPDPRGKEPLTYFVERSIAGKEGWHLASLD
MTINATRFAAFDLQKGMAYCFRVRSVNKYGISDPSEPSQPVSLGEALGVPAAPHCVQAIK
DTERSILLMWKEPKKTEGILGYYLYCNELGSSEWKTINNKPVSSTRFSVHGLRNNKQYVF
RVKSVGRAGNSHYSEESEPILVQPAKLAPSAPSAISLLNCTGTEMVIGWRAPVNNGGDPV
HGYYLDQREKSQSTWSEVNVKPVKERVYTVPGLLEGRYYQFRVIAANMVGVGKPSGPSEA
FLCERWTMPEPGCPYDLELREVRQESLVLLWAEPLYQGQSQITGYVVEISEGAESEDWTS
VAQEPIIDTYLKVSGLHAGQTYRLRVCAINSAGVGRPSFPTDPITAQTDPATREIEIGVD
NDGFIFLSFEAPETLDQIQFEWKKNYRQAIDAGRAHLETKQNKSVLTFSAAAEEDLGLYT
AEVIDKPDISSSFNFTAEDLERLMELSWHIRNPLIALRSEGWQVDVSEQGNVRLWLQTEP
LSNAAELHMILNDREISSTPARKINFDKANGLVEILFDKLSKEDEGSYTAQLKDGRAKNQ
FTLVLVDEKFRQTLAKSAAKRRDWKRRSGPYFEEFLSWAVTDDCELIMKCKVTNMNKDTK
MKWFKDGVEITQVVNEPSGVGTFTVPQVTKKEAGMYRAVVADGRGEDESILELTDNEFER
LMRCLSRNCALSAGPMRIQSTAAGFKLYCSLKYYLSYMKTSWHFKERRIDLDERTKPGSS
MQKLWIEIFNPTENDKGKYTLEMFDGQETHKRSLDLSGQVFADALLEYQRLKQVEIAEKN
RARVTKGLPDVVAIMEDKSLCLTCFAEGDPMPEMFWLKNDREIVSLGRFSVATDKGCTTI
TIHSVCMEDSGNYSVFVRNTYGSQTVNVTVSVYKHGEKPRADALEM
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaaatggtgacgtaccggtgccaggaggaggagaaggggcagatgtctcac
agcatggagttatcctcacagatcaagaagaagaaatttaaatccagtgatgaagaggcc
tccctgtctgagttctatcccatcatcccaggcgacatcatgtctgtcaaagagattctg
acggagccaaagttcccacgccacaggacatgggaggtcctgagggaaactatggataac
gatgagctccgggagagggaccagtggaccatgttcggtaatgaggcagaaaaggtggag
atcgaggtgatcaggaaccagcacatggtccgtcggcgtatggaccgcatggcgctgcgt
aaagaggcagaaaggaagatttccacacacctgaagtttctggacgatttgagtatgaag
actccggatttttccatccctcttcgtccccataccctctgggagggaatggctgtcaaa
ctttcctgcactgtcgagggttgtccattaccacacgtcacctggtataaagacggcgtt
cctctgacagcgtcctcacaaccctggaactacaaactgctacagaaatatggtctcaac
actctggagattagaaggtgtagtgttgctgacactggagaatacaaagtagtggccaaa
agctccttaggcgaggcgactacctatgccaccgttgtagtgaactcgaagcgaagactt
gaggcgggaatgaaacacacccaggctgtgggccctgtaacagaggaggaggctttgttc
gacaccaccttccctccatcttttatactagaaggaggcactctgactctgagctgtcat
tttacgtttcctctcctccccttccagcaggacgtggcctggttcagagacggagttcct
ctccgtacatctggtcggctgggcatccacacggccctgcgctcctccaccctcagcctg
aagggcatgcacaaagagcacgagggcctttacaccgtccgcctgcgcacccgagacggc
atcaccgagcacagcgcctacgtttatgtcaaagatggtcctgcggcagtgcgcggagct
ccaggttctccactccacctcgggtgctctgatgtgaacagagactatgtgtttctatcg
tgggaacctccaagtgctgagggagtgagtccagtgcagggctacttcattgagaggtgt
gagatgggcacggggaagtgggagcgctgtaacgagcttgttcagatgctgtgtcattac
ccagtcatgggtttaaaggaaaacaccatgtaccagttcagagtgtgtgcagtaaaccag
gctggcgtgggacgtccgtctaaactctccgaccccatcgtcacctctgaccccatggag
ccaagcaggactatggtggtcaaggtggatagaggcagagagattgtgatcaccaaggac
cagctggaaagtcagatccgagtccctttttccccaactgatgtgcgagtgtgtgagtta
agtgacacttatgttgtgatgtgctggactgagccggatccacggggcaaagagccgctc
acctactttgtggagcggtccatagccggtaaggagggctggcacttagccagcctggac
atgacgatcaacgctacaaggtttgctgcgttcgacttgcagaaagggatggcctactgc
ttccgtgtgcgctctgtgaacaaatatggcattagtgatccatcagagcccagccaacct
gtctcactcggagaagctctcggtgtccctgctgcaccccactgtgttcaggccattaag
gacacagaacggtcaatccttctaatgtggaaagagccaaagaaaacagaggggattttg
ggatattacttgtactgcaatgagctggggagctcagagtggaaaaccattaacaacaaa
ccagtctcaagcaccaggttctcggtgcatggcctcaggaacaacaagcagtacgtgttc
agagtgaaatcagtgggtcgggcgggaaacagccactactcagaagagtctgagccaatc
ctggtccagccagctaaattggctccatcggccccatccgccatttcacttcttaattgt
acgggcactgaaatggtgattggctggcgagcgcctgtcaataatggtggagatccggtg
catgggtactacctggatcagcgggaaaaatctcagagcacgtggagcgaggtcaacgtt
aaacctgtcaaagagagagtgtacacagttcctggtcttcttgaggggcgttattaccag
ttccgtgtaatcgcagccaacatggtcggagtcggcaaaccttctggacctagtgaggct
tttctgtgcgagaggtggacgatgcctgaacctggctgcccgtatgacttggagttgaga
gaggtgcggcaggaatctctggttttgctgtgggcggagcctctgtaccaaggtcagtca
caaatcacaggttatgttgtggagatcagtgagggggcggagtcagaggactggacttca
gtggcccaggaaccaatcatagacacgtacctaaaggtttctgggctgcatgcgggtcag
acatatcgtctccgtgtgtgtgccatcaacagtgctggagtgggaagaccttcttttccc
acagatcccatcacagcccagactgacccagcaaccagagaaatcgagattggggttgat
aatgatggcttcatcttcttgagctttgaagcacctgagacccttgaccaaatccagttt
gagtggaagaagaactacagacaggccattgatgcaggacgagcccacttggagaccaag
caaaataaatctgttctcacattcagtgcagctgcggaggaggatctgggcctttacact
gctgaagtgattgacaagcctgacatctcctctagctttaattttactgctgaagatctg
gagagactcatggagttgagctggcacatcaggaacccgctcatagcgctgcgctctgag
ggctggcaggtggacgtgtcagagcaggggaatgtgagactgtggctgcagactgagccc
ctgtccaacgccgcagagctgcacatgatcctcaatgaccgagagatctcctccacgccg
gcgcgtaagatcaactttgacaaggcgaacggtctggtggagattctgttcgataagctg
tcgaaggaagacgagggctcgtacacggctcagctcaaggacggcagagccaagaaccag
ttcaccctcgtcctagtggatgaaaagttcaggcaaaccctggccaagtcagcagccaag
cggcgggactggaagagacgctcagggccctactttgaggagtttctgtcatgggctgtg
acagacgactgtgagctgattatgaaatgcaaggtgacaaacatgaacaaggacacgaag
atgaagtggtttaaggatggtgtagagatcacgcaggttgtgaacgagccgtctggagtg
ggcacgtttaccgttccgcaggtgactaagaaggaagccggcatgtacagggccgtggtg
gctgatggtagaggagaggatgagagcattctagagttaacggacaatgagttcgagcgg
ttgatgcggtgcctgagcagaaattgtgctctctctgctggccccatgaggatccagtcc
acagcggccggctttaagctctactgctctctgaagtactatctgagctacatgaagacc
agttggcacttcaaagagaggaggatcgatctggacgagaggaccaagcctggaagcagc
atgcagaagctctggatcgagatcttcaaccccactgaaaacgacaaaggaaaatacacc
ctggagatgtttgatgggcaggaaacacacaaacgctctctggatttgtctggacaagtt
tttgcggatgctctgctggaataccagaggctgaagcaggtggaaatcgcggagaaaaat
cgtgcaagagtcacaaagggattaccggatgtggtggccatcatggaagacaagtctctg
tgtctgacctgtttcgctgagggtgaccccatgccggagatgttctggctgaagaacgac
agagagattgtctctctagggcgctttagtgtggccacagacaaggggtgcacgactatc
accatccactcggtctgtatggaggattccggcaactacagcgtgtttgtacgcaacacg
tacggctcgcagacggtaaacgtgaccgtgagtgtgtataaacacggtgagaagccgcgg
gccgatgcactggagatgtaa
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