KEGG   Ictalurus punctatus (channel catfish): 108256554
Entry
108256554         CDS       T04658                                 
Name
(RefSeq) WD repeat-containing protein 1 isoform X1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ipu04990]
    108256554
Domain-containing proteins not elsewhere classified [BR:ipu04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   108256554
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_EIPR1 Beta-prop_SCAP PEP5_VPS11_N PROPPIN Beta-prop_WDR11_1st WD40_like RMC1_N KNTC1_N WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_Nup120_160 Gmad1 Nucleoporin_N Beta-prop_IP5PC_F DUF5711
Other DBs
NCBI-GeneID: 108256554
NCBI-ProteinID: XP_053544083
Ensembl: ENSIPUG00000000350
UniProt: A0A9F7TQJ1
LinkDB
Position
2:complement(14346560..14366717)
AA seq 606 aa
MSYELKHLFASLPQMERGVAKVIGGDPKGNNFLYTNGKSVIIRNIDNPAIADVYTEHPHP
VIVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDISWTEDSKRLAVV
GEGREKFGAVFLWDSGSSVGEIIGHSKVINSVDLKQTRPYRLITGSDDNTTSFFEGPPFK
FKCTVSDHSRFVNCVRFSPDGSRYVSAGADGQIFIYDGKTAESLGALGGDKAHEGGIYAV
SWSSDSTQLISASGDKTVKLWDVASGTAVTTFKLGTDVLDQQLGCLWQKNHLLSISLSGY
INYLDKNNPNRPIRTIKGHSKSIQCVTVHKDDGQNIIYSGSHDGHINYWDAQSGENDTLS
GKGHTNSVTRLTVDDSNRLVSCSMDDTVRFTDLKKKEYSASDLAKMDAQPKTVSVGSGGL
AVAVCIGQVVLLKDKRKVFALDKLGYEPEVGTIHPGGGTVAVGGADGKVYLYSVQGNTLK
DDGKVLDTNGPVTDLQYSRDGAFLAVSNEKKVIIVYTVADGYAVKNEYYGHHAKVVCLSW
SPDNDRFASGGMDMMVYVWTISDPEKRIKIPDAHRLHHVSGLAWLDERTLVTTSHDACVK
QWTLKI
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcgtacgaactgaagcacttgtttgccagccttcctcaaatggaaaggggcgtggcc
aaagttattggtggggacccgaaagggaacaacttcctgtacacaaatggaaagagtgtc
atcatcaggaacatcgataatcccgctattgccgacgtctacacagaacatcctcaccca
gtcatcgttgccaaatatgcacccagcggcttctacattgcctcaggagatgtgtcgggt
aagatccgtatttgggacaccactcagaaggagcacttgctgaagtatgagtaccaaccc
tttggagggaagataaaggacatcagctggacggaggacagcaaacgtctcgccgtggtg
ggagagggacgagagaagttcggtgcagtgttcctgtgggactcgggctcctctgtgggc
gagatcatcggtcacagtaaggtcattaacagcgtggaccttaaacagacccggccgtac
agactcatcacaggcagcgatgataataccacctccttcttcgaggggccgcccttcaaa
ttcaagtgcaccgtcagcgatcacagccgttttgtgaactgcgttcgtttctcaccagac
ggaagccgttatgtttcagcaggggccgatggacagattttcatttacgacggaaagact
gctgaatcactgggagcgctgggaggagataaagctcatgagggcgggatttatgctgtg
agctggagttcagacagcactcagcttatctccgcatccggcgataagacagtcaaatta
tgggatgtggcgagcggcaccgcagtgactacctttaaactgggtacagacgttctagat
cagcagctgggttgcctgtggcagaaaaatcacctcctgagcatttcactgtctggatac
atcaactacctggataagaacaacccgaaccgacccattcgcaccatcaagggtcacagt
aagtccattcagtgcgtgaccgtacataaagacgacgggcagaacattatctactctggc
agccatgacggacacatcaattactgggacgctcagagcggcgagaacgacacgctatcg
ggaaaaggacacacgaactccgtgactaggcttactgtggatgactctaaccgactggtg
agctgcagcatggatgataccgtccgcttcaccgacctgaagaagaaggagtacagcgct
tctgacctcgccaagatggacgctcagccaaaaaccgtgtctgtcgggtcaggaggcttg
gctgtagctgtgtgtattggacaggtggtgctgttgaaggataagaggaaagtgttcgct
ctggataagctgggctatgagccagaagtgggcacgattcaccctggaggtggcaccgtg
gcagttggcggagctgatggaaaggtgtatctctactcggtccaggggaacaccttgaag
gatgatgggaaggttctggacactaacggccctgtgactgatctgcagtattccagagat
ggggcattcctcgctgtttcaaacgaaaagaaggtcatcattgtgtacaccgttgccgat
ggttatgcggttaagaacgagtactacgggcatcacgctaaagtggtatgtctgtcctgg
agtcctgataatgatcgctttgcctccggaggaatggacatgatggtgtatgtctggacc
atctccgatcccgagaagaggatcaaaattcccgatgctcaccggttgcaccacgtcagc
ggcttggcctggctagacgaacgcacgcttgtcacgacctctcacgatgcgtgcgtgaaa
cagtggacgctaaaaatctaa

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