Ictalurus punctatus (channel catfish): 108256576
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Entry
108256576 CDS
T04658
Name
(RefSeq) DDB1- and CUL4-associated factor 11 isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108256576
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108256576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
PROPPIN
CFAP43_N
Beta-prop_IFT140_1st
PmrD
Beta-prop_RIG_1st
Frtz
Motif
Other DBs
NCBI-GeneID:
108256576
NCBI-ProteinID:
XP_017309092
Ensembl:
ENSIPUG00000008931
UniProt:
A0A2D0PSU9
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All DBs
Position
23:complement(4367212..4380527)
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AA seq
545 aa
AA seq
DB search
MGSQSSSGMSGRGSSGNPDQSEPESNQNQATPPRSRRGTERASASEEDVDLAQVLAYLLR
RGQVRLVHGSGATGLQLVQSISDSDEDSDGAWEGRLGHRYDPPVDSHPDTQELDRSEIRT
QILLATASSHLSNKHSFTHMLNQREQGRCRGSSFSHGECSRIRSHFLPNHVAHKDTYQQK
AFCGVYSNDGNLFLSACQDQNIRLYDTSRGRFLLKRTVKARDVGWSVLDVCFTPDSRSVL
YSSWSDYIHLCSIDGESETHTALDLNPEERRFCVFSLAASIDSREVLGGANDGCLYVFDR
ELNKRTLKIDAHEDDVNAVAFADASSQLLFSGSDDALCKVWDRRTLREHSPQPVGVLAGH
RDGITFIHSKGDARYLISNSKDQTIKLWDVRKFSPKEGLTASRHAVTQQNWDYRWQQVPQ
RGETLKRHKLTGDTSVMTYRGHGVLHTLIRCRFSPEFSTGQKFIYSGCSTGKIIIYDVLT
GRVVSRLAGHEACVRDVSWHPYQDNIISSSWDGAIRLWEHRHTHLLDKDRERVSEWRPEE
TKEEK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggctcccagtccagttctggcatgtccggtcgcggctcaagcggaaacccggaccag
tcagaaccagaatcgaaccaaaaccaggccacgcccccgaggagccgcaggggaaccgag
agagcatcggcatctgaggaggacgttgatttagcacaagtactggcgtacctactgagg
aggggccaggtgaggctggtccatggcagcggggcgacggggttacagctcgtccagtct
atctcggactcggatgaggacagcgacggagcatgggagggacggctaggacatcgctat
gatcctcctgtggattcgcacccggacactcaggagctggaccgcagcgagatccgcact
cagatcctattagccacagcgtcctcacacctgagcaacaagcacagcttcacacacatg
cttaatcagcgtgagcagggtcgctgtcgcggatccagtttctctcatggggaatgcagc
cgtattcgctcacatttcctgccaaaccatgtggcccacaaagacacttatcaacagaaa
gcgttttgtggagtgtacagcaatgatggaaacctcttcctctctgcatgccaagatcag
aatattcggctgtacgacaccagccggggcagattcctcctgaagcgcacggtgaaggcc
cgagacgtaggctggagtgtgttagacgtgtgtttcacacctgattctcgctccgttctc
tactccagctggtctgattacatccatctttgcagtatagatggagagagtgaaacacac
accgctctggacctcaatccagaggaaagaaggttctgcgtgttctcgcttgcagcatct
atagacagcagagaggttctgggcggagcaaacgatggctgtctgtatgtatttgaccgt
gagctgaacaaaagaactttgaaaattgacgctcatgaggatgacgtgaacgccgtggca
tttgctgacgcttcgtctcagctgctgttctcgggcagtgacgatgcgctgtgtaaagtg
tgggacagacgcacactgagagaacactcgcctcaaccagtaggagtgttggcgggacac
cgagacggaatcaccttcatacacagcaagggtgatgcccggtatctgatcagtaattca
aaggatcagacaattaagctatgggacgtgaggaagttttctcctaaagaaggcctcact
gcatcacggcacgccgtcacacagcagaactgggactaccgctggcagcaggtcccacag
aggggtgagactttgaagaggcacaaactgacaggtgacacgtcagtgatgacatatcga
ggtcacggcgttcttcacacgctcatccgctgccgtttctcccccgagttcagcacagga
cagaagttcatctacagcggctgctcgactgggaaaatcatcatttacgatgttctgacg
ggccgagttgtgtccagactagccggtcatgaggcatgtgtgagagacgtcagctggcac
ccataccaggataacatcatcagcagctcttgggatggtgcaattcgcttgtgggagcac
agacacactcacctgctggacaaagaccgagaacgagtgagtgagtggaggccggaagag
acgaaagaggagaagtga
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integrated database retrieval system
