Ictalurus punctatus (channel catfish): 108256583
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Entry
108256583 CDS
T04658
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108256583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108256583
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108256583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG2
NUP58_M
Tox-ODYAM1
GCP_N_terminal
XAC0095_dom
Nup49_C
FapA
PSY3
Hs1pro-1_C
ASNSD1-SEP
Motif
Other DBs
NCBI-GeneID:
108256583
NCBI-ProteinID:
XP_017309100
Ensembl:
ENSIPUG00000015652
UniProt:
A0A2D0PVF6
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All DBs
Position
23:complement(8809691..8827513)
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AA seq
598 aa
AA seq
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MSGFNFGTSTLGSTNTGGGFSFGAVASTPASAPGGFSFGGLGAATSSAAAATTTTTSSLG
LSGGLFAQKPTAGFSFNTPASGASAPSTGLTLGTPAASTTPAAAAASSTGFGFGFGKPAA
SASPFSLSTTGTTSAPAATGLSLGSVITSSAPQSGSSTGFSLNLGGGVASSAPATGLSLG
SSLFSSSGSTGLGQSTLGGGLTLGGLLSSSTAATAPVAPAPSVGLGGVDFSSSSEKKSDK
SSGARPEDSKALKDENLPAPICQDVDNFQKFVKEQKQVQEEISRMSSKAMLKVQDDIKSL
KQLLSVSASGLQRNALSIDKLKMETAQELKNADIALRTQKTPPGLQHENTAPSDYFRALV
EQFEVQLQQYRQQIEELENHLTTQSSGPHITPQDLSLAMQKLYQTFVALAAQLQAVHENV
KTLKYQYLSYRRAFLDDSTDVFESKRSASRKLQSAPRVTTGPTPFGSVPNAAAVAMAATL
TQQQQPAPGSQAGFGTPFASGMGTSMGSSSLGAFGSGPAFAASGTGGSSFGFSANKPSGG
SLSAGFGSSGTSGFNFSNPGINASAGLTFGVSTAQSAGFGSGVLQLKKPPAGNKRGKR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggtttaattttggaacaagtaccctgggttccactaacaccggagggggcttt
tcttttggagcagtcgccagcactcccgcttcagcacccggtggcttcagcttcggtggt
ctgggggcggcaacgtccagcgctgccgccgccaccactaccaccacctcgtctctgggg
ctcagcggcggactgtttgcccagaaaccgacagctggcttctcttttaacacacctgcc
tcaggagcttctgcaccgtcgaccggccttaccttgggaactcccgccgcctccaccacc
cctgctgccgctgcagcatcctccacgggcttcggctttggtttcggaaaaccggcggct
tcagcgagtccattttctctgagcaccaccggcaccacctcggccccggcagccactggt
ctgagtctgggctccgtcatcacctcgtcagcacctcagagcggatcatccacagggttc
tcccttaacctgggaggaggagtcgcttcctcagcgccggccaccgggctcagcctcggc
tcctcgctgttctccagctcgggctcgacaggtctcggacagtcgactctcggtggaggt
ctgactttaggaggtttgctctcgtcctccacagcggccacggctcctgttgccccggcg
cccagcgtaggtttgggtggagtcgacttcagttcctcgtccgagaagaaaagcgataaa
tcatctggtgctcgacccgaagacagtaaagcactgaaggatgaaaacctgcctgctccc
atctgccaagatgtggacaacttccagaagtttgtcaaggagcagaagcaggttcaggag
gagatcagccgcatgtcctctaaagccatgctgaaggtgcaggacgacatcaagagccta
aagcagttgctgtcggtgagcgccagtggactgcagaggaacgccctgtctatagacaag
ctgaagatggagacggcgcaggagctgaagaacgctgacatcgctctgaggacccagaaa
actcctcctggacttcagcatgagaatacggcaccctcggattatttccgggctctggtg
gaacagttcgaggtgcagttacagcagtaccgacagcagatcgaggaactggagaaccat
ctgaccacacagagcagcggtcctcacatcactcctcaagatctgtctctggccatgcag
aagctctaccagacgttcgtggctctggccgcacagctacaagccgttcacgagaacgta
aagacgttaaagtaccagtacctgagctacaggcgggctttcctggacgactcgacggac
gtgttcgagtcgaaacgaagcgccagccggaaactgcagagcgccccgagagtcaccacc
ggccctacgcccttcggctctgtcccaaacgccgccgccgtggccatggctgccacgctc
acacagcagcagcagcccgctccaggatctcaggcgggttttggcactccctttgcctcg
ggcatgggcactagtatgggctccagcagccttggagctttcggtagtggcccggcgttc
gccgcctcagggacaggaggctcgtcgttcggtttttctgctaacaagccatcaggaggg
agcttgagtgcagggtttggaagctccggcacctcaggattcaacttcagtaaccctgga
atcaacgcgtcggctggtctgaccttcggcgtgtccacggcccagagcgcgggctttggc
agcggtgtcctgcagctgaaaaaacctccagcaggcaacaagaggggcaaaagatag
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