KEGG   Ictalurus punctatus (channel catfish): 108256583
Entry
108256583         CDS       T04658                                 
Name
(RefSeq) nucleoporin p58/p45 isoform X1
  KO
K14307  nucleoporin p58/p45
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108256583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ipu03019]
    108256583
Messenger RNA biogenesis [BR:ipu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108256583
SSDB
Motif
Pfam: Nucleoporin_FG2 NUP58_M Tox-ODYAM1 GCP_N_terminal XAC0095_dom Nup49_C FapA PSY3 Hs1pro-1_C ASNSD1-SEP
Other DBs
NCBI-GeneID: 108256583
NCBI-ProteinID: XP_017309100
Ensembl: ENSIPUG00000015652
UniProt: A0A2D0PVF6
LinkDB
Position
23:complement(8809691..8827513)
AA seq 598 aa
MSGFNFGTSTLGSTNTGGGFSFGAVASTPASAPGGFSFGGLGAATSSAAAATTTTTSSLG
LSGGLFAQKPTAGFSFNTPASGASAPSTGLTLGTPAASTTPAAAAASSTGFGFGFGKPAA
SASPFSLSTTGTTSAPAATGLSLGSVITSSAPQSGSSTGFSLNLGGGVASSAPATGLSLG
SSLFSSSGSTGLGQSTLGGGLTLGGLLSSSTAATAPVAPAPSVGLGGVDFSSSSEKKSDK
SSGARPEDSKALKDENLPAPICQDVDNFQKFVKEQKQVQEEISRMSSKAMLKVQDDIKSL
KQLLSVSASGLQRNALSIDKLKMETAQELKNADIALRTQKTPPGLQHENTAPSDYFRALV
EQFEVQLQQYRQQIEELENHLTTQSSGPHITPQDLSLAMQKLYQTFVALAAQLQAVHENV
KTLKYQYLSYRRAFLDDSTDVFESKRSASRKLQSAPRVTTGPTPFGSVPNAAAVAMAATL
TQQQQPAPGSQAGFGTPFASGMGTSMGSSSLGAFGSGPAFAASGTGGSSFGFSANKPSGG
SLSAGFGSSGTSGFNFSNPGINASAGLTFGVSTAQSAGFGSGVLQLKKPPAGNKRGKR
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgtcggggtttaattttggaacaagtaccctgggttccactaacaccggagggggcttt
tcttttggagcagtcgccagcactcccgcttcagcacccggtggcttcagcttcggtggt
ctgggggcggcaacgtccagcgctgccgccgccaccactaccaccacctcgtctctgggg
ctcagcggcggactgtttgcccagaaaccgacagctggcttctcttttaacacacctgcc
tcaggagcttctgcaccgtcgaccggccttaccttgggaactcccgccgcctccaccacc
cctgctgccgctgcagcatcctccacgggcttcggctttggtttcggaaaaccggcggct
tcagcgagtccattttctctgagcaccaccggcaccacctcggccccggcagccactggt
ctgagtctgggctccgtcatcacctcgtcagcacctcagagcggatcatccacagggttc
tcccttaacctgggaggaggagtcgcttcctcagcgccggccaccgggctcagcctcggc
tcctcgctgttctccagctcgggctcgacaggtctcggacagtcgactctcggtggaggt
ctgactttaggaggtttgctctcgtcctccacagcggccacggctcctgttgccccggcg
cccagcgtaggtttgggtggagtcgacttcagttcctcgtccgagaagaaaagcgataaa
tcatctggtgctcgacccgaagacagtaaagcactgaaggatgaaaacctgcctgctccc
atctgccaagatgtggacaacttccagaagtttgtcaaggagcagaagcaggttcaggag
gagatcagccgcatgtcctctaaagccatgctgaaggtgcaggacgacatcaagagccta
aagcagttgctgtcggtgagcgccagtggactgcagaggaacgccctgtctatagacaag
ctgaagatggagacggcgcaggagctgaagaacgctgacatcgctctgaggacccagaaa
actcctcctggacttcagcatgagaatacggcaccctcggattatttccgggctctggtg
gaacagttcgaggtgcagttacagcagtaccgacagcagatcgaggaactggagaaccat
ctgaccacacagagcagcggtcctcacatcactcctcaagatctgtctctggccatgcag
aagctctaccagacgttcgtggctctggccgcacagctacaagccgttcacgagaacgta
aagacgttaaagtaccagtacctgagctacaggcgggctttcctggacgactcgacggac
gtgttcgagtcgaaacgaagcgccagccggaaactgcagagcgccccgagagtcaccacc
ggccctacgcccttcggctctgtcccaaacgccgccgccgtggccatggctgccacgctc
acacagcagcagcagcccgctccaggatctcaggcgggttttggcactccctttgcctcg
ggcatgggcactagtatgggctccagcagccttggagctttcggtagtggcccggcgttc
gccgcctcagggacaggaggctcgtcgttcggtttttctgctaacaagccatcaggaggg
agcttgagtgcagggtttggaagctccggcacctcaggattcaacttcagtaaccctgga
atcaacgcgtcggctggtctgaccttcggcgtgtccacggcccagagcgcgggctttggc
agcggtgtcctgcagctgaaaaaacctccagcaggcaacaagaggggcaaaagatag

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