Ictalurus punctatus (channel catfish): 108256607
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Entry
108256607 CDS
T04658
Name
(RefSeq) peroxisome biogenesis factor 2 isoform X2
KO
K06664
peroxin-2 [EC:
2.3.2.27
2.3.2.36
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108256607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108256607
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108256607
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
108256607
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
108256607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_UBOX
DUF7129
DUF8118
zf-RING_2
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
108256607
NCBI-ProteinID:
XP_017309151
UniProt:
A0A2D0PUP2
W5UCM8
LinkDB
All DBs
Position
23:complement(8082549..8088391)
Genome browser
AA seq
303 aa
AA seq
DB search
MARAGSETSSPRVLRISQLDAFELDDALEQLVWSQFARCFQHFKPGLLTRVEPELKALLQ
LLVWRFTVYSSSATVGQTLLSIRYHNTLIAGQKYRSLSRRQKLWYALLTVGEKWLKERSH
SLFLRHGAHTGLQKARQALALISSAIKVASLLNFMLFLQSGTFPTLTERMLGVRPVFVRD
QSARQINFHFMNRELLWHGFAEFLIFLLPLINVWKLKTRLSALLSVPDRSSQKAESLRRS
ECGICSEWPVMPHSIGCVHVFCYYCVKSHTAADVFFTCPKCGAEVTDIQPVMFQIEMAEM
QQM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccagagccggaagtgagacctcgtcaccccgcgtcctgaggatcagccagctggat
gctttcgagctggacgatgccctggaacagctcgtctggtcccagtttgctcggtgcttc
cagcatttcaaaccaggcctgctgactcgcgtggagccggaactcaaagccctgctacag
ctcctcgtctggaggttcaccgtgtattccagcagcgctaccgtgggccaaacgctgctc
agcatccgctaccacaacacgctcatcgctggacagaaatacaggtctttgagcaggcgc
cagaaactgtggtatgctttgctcacggtgggtgagaagtggttgaaggaacgttctcac
agcttgttcctccgccatggtgcgcatacgggcctccagaaagcacgacaggctctagct
ttgattagcagcgcgattaaagtggctagcctgctcaactttatgctctttcttcaaagc
gggacgtttcccactctgacggagaggatgctcggagtgcggccggtgttcgtccgggat
cagagcgcccgtcaaatcaacttccacttcatgaaccgggaactgctttggcatggcttt
gcggagttcctcatctttctgctcccactgatcaatgtgtggaagctgaagacccgtttg
tccgcgctgttatccgttcctgatcgttcgagccagaaagcggagtctctccgacgttcc
gagtgcgggatatgctccgaatggccagtcatgccgcactccatcgggtgcgttcacgtc
ttctgctactactgcgtcaaaagccatacggccgctgacgtgttctttacgtgtcccaaa
tgcggtgccgaagtcaccgacatccagccggtcatgtttcaaatagaaatggcggaaatg
cagcagatgtga
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