Ictalurus punctatus (channel catfish): 108256611
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Entry
108256611 CDS
T04658
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108256611 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108256611 (prpf4bb)
Enzymes [BR:
ipu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108256611 (prpf4bb)
Protein kinases [BR:
ipu01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
108256611 (prpf4bb)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108256611 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Pox_ser-thr_kin
ABC1
CoV_S1_C
CSTF_C
Motif
Other DBs
NCBI-GeneID:
108256611
NCBI-ProteinID:
XP_017309154
Ensembl:
ENSIPUG00000003706
UniProt:
A0A2D0PT00
LinkDB
All DBs
Position
23:complement(467314..485834)
Genome browser
AA seq
1014 aa
AA seq
DB search
MADVGMDLQRERLNNGKEDLESPQKSGNEKSEMSEEEEEGTEQAEVNGGNLDETSKHHSG
SKHKKKKHKHRSKHKKHKHASEEEKERKRKHKHKHKKHRRKEGIPPSLGADERKTDDASP
LSENPNVDDRALLEDLEKQRALIKAELDSQLMEGKVQSGMGLILQGYNSGSEEDAEGQRP
RNGEQCQKGSGDKTFPPRDRSSRGGKARQDSPDNKSSTKRHSRSRERDRAARESRGSRLS
NSGKEIAKECSRSKEKRCSQSQNQSRERVKKSQSPSSKMRSTERKTEQKRCLSEGKEART
ERHASPHEEERRAIQEQGSQRSGSPAHSHNQRSHSKDGHSEADRDKRPGKSPSKDASSGK
ENRSPCHRRASSPRRCRSSSTHQRERQSHQTASSGSKQSYSPSRNRSPARRGRSRSADHR
RDSPSRKRSRVDGTGRSYEISPARQRVSRSPLRRRSLSPRRQSRPSPRRRSRSPFRRRSG
ERDRFGHTRGRRSTSRERERRRRRSRDEDKYKGSLSEGMKVDQDSSSDDVMEDFDAEEED
EEALIEKRRQQRLAIMQKYRTVNEDSNMGSMASEPSSPQSSTRSRSASPDDILERAAADV
KQYERENVNTFEASVKAKHNLIAQEKEGANTKKPSAPDMFTESDDMFAADFDSARLRAVG
VGKDFKENPNLRDNWTDAEGYYRVNIGEMLDKRYDVYGYTGQGVFSNVVRARDTARAGQE
VAVKIIRNNELMQKTGLKELEFLKKLNDADSDDKFHCLRLFRHFYHKQHLCLVFEPLSMN
LREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLC
DFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLYELYTGRILFPGSS
NNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTMMSTINPTK
DLLADLVGGQRLPEEQRKKVMQLKDLLDGTLMLDPAKRISINQALQHPFIQDKI
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtgggaatggacttacaaagagagaggctgaataatgggaaagaagatttg
gagagtccacagaagagtgggaatgagaagagtgaaatgtctgaagaggaggaggagggc
acggagcaagctgaggtaaacggggggaacctagacgaaacttccaaacatcacagtggc
agcaaacacaagaaaaagaaacacaagcaccgcagcaagcacaaaaagcataaacatgcg
tctgaggaggagaaggagcgcaagcgtaagcacaaacacaaacataagaagcacagacgc
aaagaggggataccaccctctttgggagccgatgaacgaaagactgatgatgcctcccct
ttgtctgagaacccaaatgtggatgaccgggctctgctagaggacttggagaagcagaga
gctttaattaaagctgagctggatagccagctgatggaaggtaaggttcagtcaggaatg
gggctaatcctgcagggttataactcaggctctgaggaggatgctgagggacagaggccc
cgaaatggagaacagtgccagaaaggcagcggggataaaacattcccaccaagggatcgt
agtagcaggggtggcaaagctagacaggactcgccagataataaatccagcacaaagcgc
cacagtcgctctagagagagagacagagcagcacgggagagcagaggcagtcggctgagt
aatagtgggaaagagatagccaaggagtgcagcagatccaaagagaagaggtgttcacag
agccagaatcaatctcgtgagagagtaaagaaatcacagtctccatccagcaagatgcgc
tcaacagaaagaaaaacagagcaaaagaggtgcttatcggagggaaaggaggctcgaaca
gaaagacacgcttctccccatgaagaagaaagaagggctattcaggagcagggcagtcag
agatcaggttcaccagcacactcgcacaatcagaggtctcattccaaagatggccactct
gaggcagacagggacaagaggcctggcaaatcgccttccaaggatgcctcatcaggaaag
gagaaccgctcgccatgccacaggcgggcatcaagtccacggcggtgccgtagttcctcc
acccaccagagagagcgccagtcccatcagacagcttcatccggatcgaaacagagctac
tctccttccaggaacaggtcccctgcaaggaggggccgcagtcgctcggctgatcacaga
agagactcgccatcacggaagcgctcccgtgtagatgggactggaaggtcatatgagatt
agccctgcacgacaaagggtcagccgttcaccactcagacgaaggtctctgtccccgcgg
cgacagtcacgtccctcaccaagaaggcggagtcgatctccttttagacgaaggtctgga
gagagggatagatttggccacaccagaggtcgtcgttccacatccagagaacgcgagcgc
aggagaaggcggagccgagatgaggacaagtacaagggaagtctgtcagagggcatgaag
gtggatcaagattcctcctcggacgacgtgatggaagattttgatgctgaagaggaggat
gaggaggctctgattgaaaagcgacggcagcagcgactggctataatgcagaaatacagg
acagtaaatgaggacagcaacatgggctcaatggcatcagagccaagcagtccacagagt
agcacacgcagtcgctctgcctcaccggacgacatcctggagcgtgctgctgctgatgtt
aagcagtatgagcgtgaaaatgtgaacaccttcgaggccagtgtgaaggccaagcacaac
ctcattgcccaggagaaagagggagccaacacgaagaaaccctctgcccccgacatgttt
acagagtcggacgacatgtttgctgcagattttgatagtgccaggctcagggctgtcgga
gttggtaaagactttaaggaaaatccaaatctcagagacaactggactgatgctgaagga
tactatcgtgtgaacattggtgagatgctggataagcgctatgatgtctatggctacaca
gggcagggtgtattcagcaatgtcgttcgagccagagacactgcccgtgctggccaggag
gtggcagtcaagatcatccgcaacaacgagctcatgcaaaagacagggctgaaggagttg
gagtttctgaagaagcttaatgatgccgattcagatgataaattccattgcttgcgcctc
ttcagacatttttaccacaaacagcacttatgtctggtgtttgagcctctaagtatgaat
cttcgtgaagtcttgaagaagtatggtaaagatgtaggtcttcacattaaggctgttcgt
tcctacagccagcagctctttctggccttaaagcttctgaagcgctgtaatattctacat
gctgacatcaaacctgacaacatactggtgaatgaatcaaagaccatcctcaaactgtgt
gattttggttcagcctcccatgtggctgataatgacattacgccttacctggtcagcagg
ttctacagagctcctgagatcatcattgggaagccatatgattacggaattgatatgtgg
tcagtaggttgcactctgtatgagctttatacaggaaggatcttgtttcctggctcctcc
aacaaccacatgatcaaactggccatggaccttaaaggaaagatgcccaacaagatgatt
cggaaaggtttgtttaaagatcaacactttgaccagaacctaaactttttgtacattgaa
gtggacaaagtgactgaaagggagaaagtgacaatgatgagcactattaaccccactaaa
gacctgctggcggacctggttggcggccagagactcccagaagagcagagaaagaaagtg
atgcagctgaaggatctgctcgatggcactctgatgttggaccctgccaagcgcatcagt
ataaatcaagccctgcaacatccattcattcaggacaagatttga
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