Ictalurus punctatus (channel catfish): 108256646
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Entry
108256646 CDS
T04658
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X3
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108256646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108256646
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108256646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
BAR
PH
Ank
SH3_9
SH3_1
SH3_2
Ank_4
Ank_3
Ank_5
DUF4404
Motif
Other DBs
NCBI-GeneID:
108256646
NCBI-ProteinID:
XP_017309202
UniProt:
A0A2D0PT64
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Position
23:694054..778992
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AA seq
1079 aa
AA seq
DB search
MRASTSRLSFSSRDPLWNRMPDQISVSEFLSETTEDYNSPTTSSFTTRLQSCRNTVSVLE
EALDQDRTSLQKVKKSVKSICSSGQEHLQNEETYAQALDKFGGNFISQDNPDLGTAFVKF
STLTKELSSLLKNLLQNLNHNVIFTLDSLLKGDLKGVKGDLKKPFDKAWKDYETKFTKIE
KEKREHAKQHGMIRTEITGAEIAEEMEKERRLFQLQMCEYLIKVNEIKTKKGVDLLQNLI
KYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLEQ
KEDSQSKQGGYSMHQLQGNKEFGSEKKGYLLKKSDGLRKVWQRRKCSVKGGILTISHATS
NRQPVKLNLLTCQVKPSTEDRKCFDLISHNRTYHFQAEDEQEFVIWTSVLTNSKEEALNM
AFRGEQSAGEDGLEDLTKAIIDEVLRIPGNEVCCDCGAADPKWLSTNLGILTCIECSGIH
REMGVHISRIQSMELDKLGTSELLLAKNVGNSNFNEIVEGNLPCPSPKPTPSSDMTIRKE
FITAKYVDHKFARRTCNSAVVKLSNLYDAVRSRDLLALIQVSAEGVELMEPLPDGGQEGG
ETALHYAVRTADHTSLHLVDFLVQNSGHLDKQTERGNTALHYCCIYEKHECLKLLLRGKP
ATDIINHNGETALDVARRMRIDQSAEALMQAAEGKFNPKVHVEYDWNLRLEEMDESDDDL
DDKPSPIKKDRRPQSFCHSSSLSPHDKLSLPAFPVQRDKPRLSYGMFTNQMYSVSTDCPS
SPVSDAPPLPPRNAGKGSDSTPPPINKMSPITNRFEGILQQQSTASSTTKATLGPRVLPT
LPQKFVLRKTETIHHPSVDKPSQPPEPVQFQKSPPGSDTPQKVPLPDKPHPGDLHPKPQI
TELPPKPGELPPKPQFFDLPPKPQLGDLPPKPHLKDLPPKPLLSDLSNPKHGLPEPMHKP
PPGEVAHKPEPYDTPVTNQQAEPLPQLTHSTEDTNGSLASGPETPIPLPRKFSTGKIKLR
RVKTIYDCQADNDDELTFVEGEVIVVTGEEDQEWWIGHIEGQPERKGVFPMSFVHILSD
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgagagcatcaacctcccgtttaagtttttcctcaagggatcctttatggaaccggatg
ccggatcagatatcggtgtccgagtttctgtcggagacgacggaggactacaactcaccc
acgacctccagcttcacgacccgcctccagagctgcaggaacaccgtcagtgttttagag
gaggccttggatcaggacaggacttcactgcagaaagttaagaagtctgtcaaatccatc
tgcagttctggccaagaacaccttcagaatgaggagacatatgctcaggcactggacaag
tttggcggtaacttcatcagccaagacaaccctgacctgggaacggcctttgttaagttc
tccacgctgacaaaggagctctcgtccctgctcaaaaacctgctccagaacctgaatcat
aatgtgatcttcacactggattctctgctgaaaggagatctgaaaggcgtaaagggggac
ctgaaaaagccatttgacaaagcctggaaggactatgaaacaaagtttacaaagatagaa
aaggaaaaacgagagcacgccaagcaacatggcatgatccgaacagagatcacaggtgct
gagatcgcagaggaaatggagaaagagcgacggctttttcagcttcagatgtgtgagtac
ctgatcaaggtgaatgagataaagaccaaaaaaggtgtcgacctcctccagaacctgata
aagtattaccatgcacagtgcaatttcttccaggatggcttgaagacagctgataagctc
aagcagtacattgagaagctagctgctgatctttacaacataaagcaaactcaggatgag
gagaaaaagcagctgacagctcttagggatcttatcaagtcctccttgcagttagagcaa
aaggaggactcgcagagcaagcagggaggctacagcatgcaccaactgcagggtaacaaa
gaatttggcagtgagaagaaaggatatctgctgaaaaagagtgatgggctgagaaaggta
tggcaaagaagaaagtgctcagtgaaaggaggaattctcaccatctctcatgccacgtcg
aacaggcagccggtcaaactgaacctactcacatgccaggtcaagccgagcactgaagat
cgcaagtgttttgatctcatttcccataatcggacatatcactttcaggctgaagacgaa
caggagtttgtaatctggacctcagtgttaacgaacagtaaagaagaggcgttgaacatg
gcgttccgaggagagcagtcagcaggagaagacggcctggaggatctaactaaagccatc
attgacgaagtcctgcgcatacctggcaatgaggtttgctgcgactgtggtgctgcagat
ccaaaatggttgtcgactaacctgggcatcctgacgtgtatcgagtgttcaggcattcac
agggagatgggtgtgcacatctctcgcattcagtccatggaactggacaaactgggaacc
tccgaactcttgctggccaagaatgttggaaacagtaattttaatgagattgtggaagga
aatcttccctgtccctccccaaagcctactccatctagtgatatgacaatccgcaaggag
tttataaccgccaaatatgtggaccataaatttgcgaggaggacttgcaactcagccgtg
gtgaagctgagcaatctgtatgatgcagtgaggtcacgtgacctgctggctctcatccaa
gtgtctgctgaaggggtggagcttatggagccacttcctgatggaggacaggagggtgga
gagacagcgctgcactatgccgtgaggactgccgaccacacgtcactgcacctggtcgac
tttctggttcagaacagtggacatctggataaacagactgagagaggaaacacagccctg
cactactgctgcatctatgaaaaacacgaatgcctaaaattactcctaagaggcaaacct
gctactgacatcatcaatcataatggagaaacagcactggatgttgccaggcggatgagg
attgaccagtctgcagaggcattaatgcaagctgcagagggcaagtttaatccaaaggtt
catgttgagtatgactggaatcttagactggaggaaatggatgagagcgatgatgatctt
gatgacaagccaagccctattaagaaagaccggagaccacaaagtttctgtcactcatcc
agcctgtctcctcatgataagctctccctcccagctttccctgtccagcgtgataaaccg
cgcctctcctacggcatgtttaccaatcagatgtacagcgtttccactgactgtccctct
tcccctgtcagtgatgcaccacctctaccacccaggaatgcaggaaaaggaagcgactcc
acaccacctccaatcaataaaatgtctcccataacaaaccgatttgaaggcatactacaa
caacagagcacagcgtcgagtaccactaaagctacgcttggcccaagggtccttcccaca
ctacctcagaagtttgtcctgcgtaagaccgaaacgattcaccacccatcagtggacaaa
cccagccagcctccagagccagtgcagttccagaagtctcctccagggtcagacacacca
cagaaagtccctttacctgataaaccccatccaggggacctccatcctaaaccccagatc
acagaattaccacctaaaccgggagaactacccccaaaaccacagttctttgacctgccc
cccaaacctcaactgggagacctcccacccaaacctcacctcaaagacctcccacccaaa
ccactactttctgacctctcaaaccccaaacatggactccctgaacctatgcacaagccc
cctcctggagaggtggctcacaaacccgagccctatgacacgccagtgactaatcaacaa
gctgaaccattacctcagctcacccactccaccgaagataccaacgggagcctggcgtcc
ggcccagaaactccaataccgcttccaaggaaattcagtacaggtaagattaaactgcgg
cgagtgaagaccatctacgactgtcaggcagataacgatgacgagctcacatttgtagag
ggcgaggtcattgtggtaacaggggaggaggatcaagagtggtggattggacatatagaa
ggacagccggagagaaagggtgttttccccatgtcctttgtgcatatcctgtctgactga
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