Ictalurus punctatus (channel catfish): 108256648
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Entry
108256648 CDS
T04658
Symbol
tfr1b
Name
(RefSeq) transferrin receptor 1b
KO
K06503
transferrin receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03273
Virion - Lassa virus and SFTS virus
ipu04144
Endocytosis
ipu04145
Phagosome
ipu04216
Ferroptosis
ipu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
108256648 (tfr1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108256648 (tfr1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108256648 (tfr1b)
04145 Phagosome
108256648 (tfr1b)
09143 Cell growth and death
04216 Ferroptosis
108256648 (tfr1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108256648 (tfr1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108256648 (tfr1b)
04090 CD molecules [BR:
ipu04090
]
108256648 (tfr1b)
Peptidases and inhibitors [BR:
ipu01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
108256648 (tfr1b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108256648 (tfr1b)
Exosomal proteins of colorectal cancer cells
108256648 (tfr1b)
CD molecules [BR:
ipu04090
]
Proteins
108256648 (tfr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M28
PA
TFR_dimer
Motif
Other DBs
NCBI-GeneID:
108256648
NCBI-ProteinID:
XP_017309204
Ensembl:
ENSIPUG00000016869
UniProt:
W5US45
LinkDB
All DBs
Position
23:9384965..9399000
Genome browser
AA seq
776 aa
AA seq
DB search
MAGCINQGNVKFSNIFRKETSRYRDLTQDQDQDQIIDGHEISVELKSSSEGGEEMDGSFA
QRQRKPNRKWSKVAKIALIVIFFFITGYLIGYVTPHNPDVTVNTTDSMETSISATEVADE
EPESELKDNEPSQSFADWSSVRVALREKLTTANFHKSLQEFSSPNHQAGSEGDHDLAEKV
LAKFRNLGMDTWMDVHYVKLQVPSGENKVSMEAEEIGRPKGYLAYSATGTKQGKVVYANY
GRREDLENLQNQRLNLTENIALVRAGKISLAEKVANAARFGLAAVLIYREPNNEGELNAE
FFGQVHLGTGDPYTPGFPSFNHTQFPPSKSSGLPEILAQTVTAEMARKIHLKMGGKDAPK
EFAGTLPGVSKYMLGGETDVTVTINNVLADTKIFNIFGVIKGFMDPDRYVVLGAQRDAFS
HGFAKSTVGTALLVELATAVRDMMKDGFKPRRSIVFASWSAGDFGSVGSTEWLEGYISSL
NLRAFTYISLDSTVSGIKQFKASSSPLLHKLLKNTMDEVKSPLHVSRSISEDFAGSKWEQ
SVLEPMRMDDGAYPFLAFSGIPSVSFRFVSDSDFSGTDLDTRENLDAATEQKLLEVCVSA
ARFAGQMALRLVHDHILNLDVDEYTRIIRKNVRGIGKQIKQVAAINSNASFALKDFWLSS
VIGSYSRAALALHNEIKNSDLDVAETCRNINDRIMRVEHNLLSPYVSPRDVPFRHIIFGL
GDYSISALLEHLGSLTQQAVGSDADLFRNQFALITWTIQSCANDLAGNVWALDNLI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatgcatcaatcaaggaaacgtgaagttttcaaacatcttccgtaaggagacc
agcaggtacagggacctgacccaggatcaggatcaggatcagatcatcgatggtcatgag
atctcagtggagctgaagtcctcgtccgagggaggagaggaaatggacggatctttcgct
cagagacagcgtaaaccgaacaggaaatggagcaaagtggccaagattgcgctcatcgtt
atcttcttctttattactggttaccttattggttatgtgacgccccacaaccctgacgtc
accgtgaacaccacagactccatggagacttcaatctctgctactgaagtcgctgacgaa
gagccggagtctgaactgaaggacaacgagccctctcagagctttgcggactggagcagt
gtcagggtcgcgctgagagagaaactcacaactgcaaacttccacaaatccttacaggag
ttttcctctccgaaccatcaggccggcagtgagggagatcacgacctggcggagaaggtg
ttggcgaagttcaggaatctgggcatggacacgtggatggatgtgcactacgtgaagctg
caggtgccgtccggggagaacaaagtgtcgatggaggctgaggagataggaagaccaaaa
gggtatttagcgtacagcgcaacgggaaccaaacagggaaaggtggtgtacgctaactac
ggccgaagagaagatctggagaaccttcagaaccagagactgaacctgacggagaacatc
gctctggtgagagctggaaagatcagcctggctgagaaggtcgcgaacgccgcacgcttt
ggtctagctgcggttctgatctatcgggagccgaacaatgagggcgaactcaacgcagag
ttcttcggccaggttcacctcggaactggagatccttacactccggggtttccttccttc
aaccacacccagttccctccttctaaatcctccggtctccccgagattctggctcagacc
gtcaccgcggaaatggctcgcaaaatccatctgaagatgggaggaaaggacgcgcccaaa
gagtttgcaggaacgctgccgggcgtctctaaatacatgctgggaggagagacggacgtc
accgtgacgattaataacgtcctcgccgacaccaagattttcaacatttttggagtcatt
aaaggcttcatggatccagatcgctacgtggtgctcggcgctcagagagacgcgttcagc
catgggttcgccaagtccaccgttggcacggcgctgctggtggagctcgccaccgccgtc
agggacatgatgaaagatggatttaagccgaggaggagcatcgtgttcgccagctggagt
gctggagatttcggcagcgtcggttctacagaatggcttgagggttatatctcctctctc
aacctccgagccttcacctacatcagcctggactccaccgtgtctggtataaagcagttc
aaagcctcctccagtcctctgttacacaaactcctgaagaacacaatggatgaggtgaag
agtcctctgcatgtgagtagatccatctctgaggatttcgctggctctaaatgggagcag
tcagttctggagcccatgaggatggacgacggagcgtatcctttcctggccttctctgga
attccctccgtctccttccgcttcgtctcagacagcgacttttctggaacagatctggac
accagagaaaatcttgacgcggccaccgagcagaagcttctggaagtctgtgtgtctgca
gctcggtttgcgggacagatggcgctccggctcgtccacgatcacatcctcaatctggac
gtagatgagtacacgcgcatcatcaggaagaacgtgcgtgggatcggaaagcagatcaaa
caagttgcagcaattaattctaacgcatcctttgcgctgaaagatttctggctgtcctcc
gtgattggatcatattctcgtgccgctttggctctgcacaacgagattaagaacagtgac
ctggacgtcgcagagacgtgccgcaacatcaacgaccgcatcatgagggtggagcacaac
cttctgtctccgtacgtctccccgagagacgtcccgttccgtcacatcatcttcggcttg
ggtgattacagcatcagcgctctgctcgagcacctcggatctctgacgcagcaggctgtg
ggttctgacgccgatctgttccggaaccagtttgcgctgattacctggaccatccagagc
tgcgctaacgacctagcgggaaacgtctgggctctggacaacctcatctga
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integrated database retrieval system
