Ictalurus punctatus (channel catfish): 108256657
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Entry
108256657 CDS
T04658
Name
(RefSeq) upstream stimulatory factor 2 isoform X1
KO
K09106
upstream stimulatory factor
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108256657
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
108256657
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_ILI
Anthrax_toxA
bHLH_INO2
APC_N_CC
USHBP1_PDZ-bd
CC149
FlxA
APG6_N
Motif
Other DBs
NCBI-GeneID:
108256657
NCBI-ProteinID:
XP_017309226
Ensembl:
ENSIPUG00000023283
UniProt:
A0A2D0PUW9
LinkDB
All DBs
Position
23:complement(17247502..17263803)
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AA seq
297 aa
AA seq
DB search
MDVLQQTLDSSLRQMKQEKDTSEITEDALRGGEAAAFPHTSAFTDRSVQYQFLPDSSGTQ
VTYQVVQLTNQPLVGGTVGVVSSASFTGAQQAVIQSPFSNGGNPAVETIGGEARFSYIPP
AAVSDATTAGVSAHPAEPTRSHTAGQFYVMSTPEVLQPGAPRTIAPRTHPYAAKMEGLRT
PRDERRRAQHNEVERRRRDKINNWIVTLSKIIPDCSMDSTKTGASKGGILSKACDYIQEL
RQSNHTLHESLHEVKRVQMDNDILRQQVEELKNENALLRAELQQRQAATDVTDVPSH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctgcagcagactttggactcctcgttgaggcaaatgaaacaagaaaaggac
acatcagagataactgaagacgctttgagaggaggtgaagcagctgcatttcctcacact
tcagctttcactgaccggagcgtccagtatcagtttctccccgacagcagcggtacgcag
gtaacctatcaggttgttcagttgactaatcagccgttggtgggtgggacagttggcgtg
gtgtcttctgcttcatttactggagcccaacaggctgtgatccagagtcccttcagtaat
ggaggcaatcctgcagtagagacgatcggaggcgaggcacgcttctcctacatcccacca
gctgccgtgagcgatgcgacaaccgccggagtttcagcccatccggccgagcccacacgc
tctcacacagcaggtcagttctacgtgatgagcacgccggaagttcttcagccaggcgca
ccacgtaccatagctccccgcactcatccatatgcagcgaagatggaaggactgcgaacg
ccgagagacgaacgcaggagggcgcaacacaatgaagtggagcgacggaggagagacaag
atcaacaactggatcgtgacgctgtctaaaatcatcccagactgcagcatggacagcact
aaaaccggagcgagtaaaggaggcatcctgtccaaggcctgcgattacatccaggagctg
cggcagagcaaccacacactccacgagagtctccacgaagtgaagagagtccagatggac
aacgacatccttcgacagcaggtggaggagctgaagaacgagaacgctttgctccgagct
gagctacagcagcgccaagccgccacagacgtcacagacgtgccatcgcattga
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integrated database retrieval system
