Ictalurus punctatus (channel catfish): 108256691
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Entry
108256691 CDS
T04658
Name
(RefSeq) cilia- and flagella-associated protein 57-like isoform X1
KO
K24729
cilia- and flagella-associated protein 57
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ipu03037
]
108256691
Cilium and associated proteins [BR:
ipu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
108256691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
CFAP251_N
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
EIF3I
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_VPS8
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_TEP1_C
Nucleoporin_N
CNH
B-prop_COPA_B_2nd
Beta-prop_ACSF4
Beta-prop_SCAP
RAG1_C
VPS11_N
Motif
Other DBs
NCBI-GeneID:
108256691
NCBI-ProteinID:
XP_017309317
UniProt:
A0A2D0PTH6
LinkDB
All DBs
Position
2:4258008..4272541
Genome browser
AA seq
1190 aa
AA seq
DB search
MTSSVMQKACTNAAMASGGSSPQVQPCHIFGVCKGVRNNLLFQDEETMIFPSGNHCVRYH
VLQRRTKFIQGVKGNMKALALSPDRRYLAVSESDKWGTITIFDLEDGKCCKKQVLKGSDY
SVQEFVCMAFSADSKYLLGQAGGPTWTLYFWQWQEKQLIDSVKTTRNGLISQVSFNPQDE
KQICVSGTRTFKIFELKKASLRQANSYNKENEDVLCHTWLSGDCIVAGTEAGKLLKLKSG
QLHQLGRPYERQTEKKDSTSSPDQPASVTAITQYSKGFACSAGLGLVCLYEISNENDNYR
KTAEISIPVDPYSSQPLQAIATMCFSPAEKTLVISTDRGKLYRISLTSTEISESKKAQFE
FLSHSLHSESITGMSICTSKPLVATCSKDFTVHIWDYKTNSLEQFKEFDEEPLCVSMHPN
GLSILVGFSSEIRLMHLHYDKIRTVQKFPTKNCTECVFNHDGNMFAAVNKKVIHVYNIRT
GKKLDLNAHLKKVQSVKWSEDDLHLVSCGMDGIVCMWDVLTGSCTSSKETDCGYADVIFT
PNTGSVHAVDRCSLKEIHDGSILRQMASDGVDYTAISMTRSGQTIFIGTAVGTVRDIEYP
FGKEKTWTEHQAHSGPITKMVVTPGDQYLLTASEDGSLLIWTITDPEGKTLKWIKGMEHA
DEVLCTKEELEEKDQTICELTSHTEWLKLEMQYKLNLKDMDWTTKMNSIFQGYLQQIEAL
KDQIQVLNTEREDQKDSHQKALTELKEEHAKQLEDQKHSCIEGLLDKDEMYYKLQQKMQM
MEKNHEMQLRNAEDSHLCAMENMKQAYEAKLQELRAELEQEVKNSEKKQVRIKEVAESEV
MELCRNYEHDLQLEKDGRVKAELELKLMEKNISRYLKMKRLIEDQEDTIRQLKENVQKLK
DQLDDATERIEALNKKKEEKNKTIDEQLCFIEELQHTVQNEDMSLEDKQEELVQKIFLHK
KGEEKKSYKERSKINRLEKEIQEKKEMLDEAAAELALNNRKNEDIIYDLKEKLKSNNTEL
FTERQRVRNINMVVQKMKDDIRSCARFIQEPMRLKQNFIELHTRHIHTQDGTIGVDAEVT
EEETRYLKDFHTILAQEKTMHARDMKLEKDRYSKLLKERGFLINQLYDQKLKHEQLLNSL
KRKNVQCDDTAASSVIPLGESGLQSSANLDTRRGQVFASDRVRFPSINTT
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgacttctagtgttatgcagaaagcttgcacgaacgctgcaatggcttctggtggatct
tcaccacaagtccagccttgccacatctttggtgtgtgcaaaggggtaaggaacaactta
ctgtttcaagatgaggaaacgatgattttcccaagtggaaaccactgtgtccgctaccac
gtccttcagagacggaccaagttcattcagggtgtgaagggaaacatgaaggctctggct
ttaagccccgaccggcgctacctggccgtgtcagagagcgataaatggggcaccatcacc
atctttgacctagaggatgggaaatgctgcaagaaacaggttctgaagggcagcgattac
agcgtgcaggagtttgtctgcatggcgttttcggctgactctaaatacctgctgggccag
gctggaggacccacatggaccctctacttctggcagtggcaggaaaagcagcttatcgat
tctgtgaagaccacgaggaatggccttattagtcaggtaagctttaaccctcaggatgag
aaacagatctgtgtgagcggaacaagaaccttcaagatcttcgaattgaagaaggcgtcc
ctgagacaggccaactcctataacaaggagaacgaggatgtcctttgccacacgtggctg
tccggggactgcatcgtcgcaggaactgaggccgggaaactgctaaagttgaaatccgga
caactgcaccagctggggagaccatatgagagacaaacagagaagaaggactcaacttca
tctccggaccaaccggcgtctgttaccgccatcacgcagtattctaaaggctttgcctgt
tcagctggactgggattagtttgtctctacgagatatctaatgagaacgataactacagg
aagactgcggaaataagcattcctgtggacccatacagcagtcagccgcttcaggcgatt
gccacgatgtgctttagtccagcagagaagacgctggtcatcagcacagaccgaggcaaa
ctctaccgcatcagcctcacctcgaccgagattagcgagagtaagaaggcccagtttgaa
ttcctgtctcactctcttcactcggagagcatcaccgggatgtccatctgcacatcaaaa
cccctcgtcgccacctgctcgaaggacttcaccgtgcacatttgggactacaagaccaac
tctctggagcagtttaaggagtttgatgaagagccgctctgcgtgtcgatgcacccgaat
ggcctctccatcctggtgggcttctccagtgaaatccgcctcatgcacctgcattatgac
aaaatccgcactgtccagaagttccccacaaagaactgcactgagtgtgttttcaaccac
gatggcaacatgttcgcggccgtcaacaaaaaagtgatacacgtttacaacatcagaaca
ggcaaaaaactggacctgaacgcccaccttaagaaggtgcagtcggtgaagtggagcgaa
gatgaccttcatctggtgtcatgtgggatggatggcatcgtgtgcatgtgggacgttctg
accggcagctgcacatcaagcaaagagactgattgtggctatgcagatgtgatcttcaca
cctaacactgggagcgtccacgctgtagacagatgcagtcttaaggagatccatgatgga
agcatcctaaggcaaatggcctcagatggtgtggactacacagccatctccatgactcgt
tcaggccaaacaatcttcattggaaccgccgttggtactgtcagggacatcgaataccct
tttggaaaggaaaaaacctggacagaacatcaggcccattctggtcccatcaccaaaatg
gtcgtcacgcctggtgatcagtatcttctgacggcctcagaggacggctccctcctcatc
tggacaatcactgacccagagggaaaaacgctgaagtggatcaaaggaatggagcatgct
gatgaggtcctctgtacaaaggaggaactcgaggaaaaggaccagactatatgtgagctc
acgtcccacaccgagtggctgaagttggagatgcaatacaagctgaatttgaaggatatg
gactggaccacaaagatgaacagcatttttcagggttatctccagcagatagaggctttg
aaagaccaaattcaggtgctgaacactgagagggaggaccagaaggattctcaccaaaag
gcgctgaccgagttgaaggaagaacacgccaagcagctggaggatcaaaagcatagctgc
attgagggcctgcttgacaaggacgagatgtactataagctgcagcagaaaatgcagatg
atggagaagaaccatgagatgcagctgcgcaatgctgaagacagccacctctgtgctatg
gagaacatgaaacaggcctatgaagccaagctgcaggagctacgggccgagttggagcag
gaagtgaagaactctgagaagaagcaggtaaggattaaggaggtggctgaatctgaggtt
atggaactttgtcgcaactatgaacacgatctccagttggagaaggacggcagggtgaag
gctgagcttgaactgaaactcatggagaaaaatatatcgcggtacttgaaaatgaagcgc
ttgatagaagatcaggaagacacgatacgtcagctgaaggagaacgtgcagaaactgaag
gaccaactcgatgatgcgacagaacgcatcgaggctttgaataagaagaaggaggagaaa
aacaagaccattgatgagcagttatgcttcattgaagaactccagcacacggttcaaaat
gaggacatgagcttggaagacaagcaggaagaactggtccagaagatcttcttgcataaa
aagggtgaagagaaaaagagctacaaagaaaggagcaaaatcaaccgacttgagaaagaa
atacaggagaagaaagaaatgttagacgaggctgctgccgagctggcgctaaacaacagg
aagaatgaggatatcatctatgacctgaaggaaaagctgaaatcaaacaacacagaattg
ttcacagagagacagagggtcagaaacatcaatatggtggtgcaaaagatgaaggatgac
atccgcagctgcgcacgattcatccaggagccgatgaggctgaagcagaacttcatagag
ctccatacacgccatatccatacacaagatgggacaatcggagtggatgctgaggtcacg
gaagaggaaaccaggtacttgaaagacttccacacgatcttagcgcaagagaagacaatg
catgctagagatatgaagcttgagaaagatagatactccaagttgctgaaggagcgtggc
tttctgattaatcagctctatgatcagaaattaaagcacgagcaactcctgaacagcctc
aaaaggaagaatgtgcagtgtgacgacacagcagcatcctctgtgatccctctgggagag
tccgggcttcagtcgtcagcaaacctggatacgagacgaggccaagtttttgcatcggac
cgtgtcagatttccatccattaacaccacatag
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