Ictalurus punctatus (channel catfish): 108256700
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Entry
108256700 CDS
T04658
Symbol
atp6v1c1a
Name
(RefSeq) V-type proton ATPase subunit C 1-A isoform X1
KO
K02148
V-type H+-transporting ATPase subunit C
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00190
Oxidative phosphorylation
ipu01100
Metabolic pathways
ipu04145
Phagosome
ipu04150
mTOR signaling pathway
Module
ipu_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
108256700 (atp6v1c1a)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108256700 (atp6v1c1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108256700 (atp6v1c1a)
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Gene cluster
GFIT
Motif
Pfam:
V-ATPase_C
Folliculin
NRIP1_repr_1
Motif
Other DBs
NCBI-GeneID:
108256700
NCBI-ProteinID:
XP_017309329
Ensembl:
ENSIPUG00000023066
UniProt:
W5UCB0
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All DBs
Position
23:complement(16193171..16205712)
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AA seq
383 aa
AA seq
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MTEFWLISAPGEKTCQQTWDKLMVATTRTNNLSTNNKFNIPDLKVGTLDVLVGLSDELAK
LDSFVESVVKKVAQYMADVLEDSRDKVQENLLANGVDLITYITRFQWDMAKYPIKQSLKN
ISEIISKQVTQIDNDLKARASAYNNLKGNLQNLERKNAGSLLTRSLADIVKKEDFVLDSE
YLITLLVVVPKTNYADWQKTYETLAEMVVPRSTNLLFEDHDSGLFSVTLFRKAIDDFRHK
ARENKFVVRDFQYNEEEMKADKEEMTRLSTDKKKQFGPLVRWLKVNFSEAFIAWIHIKAL
RVFVESVLRYGLPVNFQAMLLQPNKKNMKKLREVLYELYKHLDSSAAAIIDQSAMDIPGL
NLSQQEYYPYVYYKIDCNLLDFK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggagttctggttgatctcggctcctggagagaaaacctgccagcaaacatgggac
aagctgatggtggccaccactcgcaccaacaacctgtccactaacaacaagttcaacatc
ccggaccttaaggtcgggacgttagatgttttagtcggactctcagacgagctggccaag
ttggactcttttgtggagagtgtggtgaagaaggtggcgcagtacatggccgacgtgctt
gaggacagccgtgataaagttcaggagaacctgctggcaaacggagtggatctgatcacc
tacatcacgaggttccagtgggacatggcgaaataccccataaagcaatctctgaagaac
atatctgaaatcatatctaagcaagtaacgcagattgataacgacttaaaggctcgagct
tcagcctacaacaacctgaagggaaacctgcagaacctggagaggaagaacgcagggagc
ctgctgacccgcagcctggccgacattgtaaagaaagaggactttgtgctggactccgag
tacctcatcactctgttggtggtggtaccgaagaccaattatgcagactggcagaagacg
tatgagactctcgcggaaatggtggtgccgcggtccacaaatttgctgtttgaggatcac
gacagcgggctgttcagtgtcacgctgttccgcaaagccatcgacgacttcaggcacaaa
gccagagagaacaagttcgtagtacgagatttccagtacaacgaggaagaaatgaaggcg
gataaagaggaaatgacgaggctctccaccgataagaagaagcagtttggtcctctggta
cgatggctgaaagtgaacttcagtgaagccttcatcgcctggatccacatcaaggctctg
agggtgtttgtggagtctgtgttaaggtacggcttacctgtgaacttccaggccatgctg
ctgcagcccaataagaagaacatgaagaagctgagagaagtgctgtatgagctctataag
catctggacagcagtgctgctgcgattatcgatcaatctgctatggacattcccgggctg
aatctgagccagcaggagtattacccctacgtctactacaaaatcgattgcaacctgctc
gatttcaaataa
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