Ictalurus punctatus (channel catfish): 108256733
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Entry
108256733 CDS
T04658
Name
(RefSeq) hepatocyte nuclear factor 4-gamma isoform X1
KO
K08037
hepatocyte nuclear factor 4-gamma
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108256733
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ipu03310
]
108256733
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
108256733
Nuclear receptors [BR:
ipu03310
]
2. Hepatocyte nuclear factor 4 like
2A. Hepatocyte nuclear factor 4 receptor
108256733
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
108256733
NCBI-ProteinID:
XP_017309388
Ensembl:
ENSIPUG00000014701
UniProt:
A0A2D0PS52
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All DBs
Position
23:7786793..7800851
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AA seq
462 aa
AA seq
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MKFSQSPVSKSLLDMDVANYCEGLDPTYSTLSFENADMLYSGESMPTEPSISHGDNGVIS
NCAICGDKATGKHYGASSCDGCKGFFRRSIRKSHVYSCRFSRQCVIDKDKRNQCRFCRLH
KCFRAGMKKEAVQNERDRISSRRSTPDSHDLPPITVLAQAETLSQQIGVASPTGSADISE
KKSAAVGDVCESMKQQLLVLVEWAKYIPAFGELPLDDQVSLLRAHAGEHLLLGVAKRSMP
YKDVLLLGNGCVIHRNCPEAEISRVANRVLDELVSPFQDIQIDDNEYAALKAIVFFDPDA
KSLRDPSKIKSMRCQVQMSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQLQFIK
LFGLAKIDNLLQEMLLGGLTTEQPYLHHHGHPQLAQDPITGQTLVISSISGPLHAQQIAS
PDTPIPSPPQVQSQEIYKASSSPTLLMPTQPISNRPSPEPPL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttctcagagtccggtatccaaatcccttctggacatggatgtagctaattac
tgtgaaggcctggaccccacctatagcacgctgagctttgagaatgctgatatgctgtac
agcggggaaagcatgccaacagagcccagcatcagccatggggataatggcgtgatctcc
aactgtgccatctgtggggacaaggccacaggcaagcactacggcgcgtctagctgtgac
ggctgcaagggctttttccgcaggagcatcaggaagagccacgtctactcgtgcaggttc
agtcgccagtgcgtcatcgacaaagacaagaggaatcagtgccgcttctgcaggcttcac
aaatgctttcgagctggaatgaagaaagaagctgtgcagaatgaacgggatcgtatcagc
tccaggagaagcacaccggactcacatgaccttccgcctatcactgtgctggcgcaggca
gagaccctttcacaacagattggcgtcgccagtccgaccggctccgcggatatctccgag
aagaaatcagccgccgtcggggacgtgtgcgagtctatgaagcaacagctgcttgttctg
gtagagtgggctaaatacatcccggccttcggcgaattgcctcttgacgaccaggtcagt
ttattacgagcgcacgcaggagaacatcttctgctcggagtggccaagcggtcaatgcca
tacaaagacgtcctgctgctcggtaatggctgtgtcattcaccgaaattgccccgaggcg
gagatcagccgagttgctaaccgcgtccttgacgaattggtctcacccttccaagacata
cagattgatgacaatgaatacgcagctctcaaagccattgttttttttgaccctgatgcc
aaaagcctcagagatccctcgaagataaaaagcatgaggtgccaggttcagatgagtctt
gaagactacattaatgaccgtcagtacgactctcgtgggcgctttggcgagctactgctg
cttctccctactctgcagagcatcacctggcagatgatcgagcagctccagttcatcaaa
ctctttggcctggccaagatcgacaacctgctgcaagagatgctgctaggaggtctgacc
acagagcagccttacttgcaccaccacggccacccccagctcgcccaggatccaatcacg
ggccaaacgttagtcatcagctccatttcaggccctctgcatgcacagcaaatagcttct
ccagacaccccaatcccatctcctcctcaggttcagagtcaggagatctataaggcctcc
tctagtcctacactcttaatgccgacacagcccatctccaacagaccctctcctgagcca
ccactctga
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