Ictalurus punctatus (channel catfish): 108256863
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Entry
108256863 CDS
T04658
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04060
Cytokine-cytokine receptor interaction
ipu04217
Necroptosis
ipu04620
Toll-like receptor signaling pathway
ipu04621
NOD-like receptor signaling pathway
ipu04622
RIG-I-like receptor signaling pathway
ipu04623
Cytosolic DNA-sensing pathway
ipu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
108256863
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
108256863
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108256863
04621 NOD-like receptor signaling pathway
108256863
04622 RIG-I-like receptor signaling pathway
108256863
04623 Cytosolic DNA-sensing pathway
108256863
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108256863
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ipu04052
]
108256863
Cytokines and neuropeptides [BR:
ipu04052
]
Cytokines
Interferons
108256863
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
108256863
NCBI-ProteinID:
XP_047006488
UniProt:
A0A979E0M1
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Position
24:20345123..20350288
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AA seq
192 aa
AA seq
DB search
MTVLNVWVFIVIALNSWNCARACAWMKTQNKATLSNFQVLSTNSIVHLQQACRDAGHDHG
HLIMEFPNKQYNLITHLQANDHILFILRTLKGVMRIYRRKSKEMNCDQHKLRIFLLEVDR
QILELERCARYIVTDEVHKRMFKEMEIHFRSLVSHLRNTEYNAKSWNDVAGVILKHLQRL
DLLATTTKTILN
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgacagtattaaatgtgtgggtgtttattgtcattgcgctcaatagctggaactgcgcg
agagcatgcgcatggatgaagacacagaacaaagcaactctcagcaactttcaggtttta
agcaccaactccattgtgcaccttcagcaggcgtgcagagatgcaggacatgatcatgga
catctgatcatggagttcccaaacaaacaatacaacctcataactcatctgcaggcaaat
gaccacatactgttcattttgcggactctaaagggtgttatgaggatctataggagaaaa
tctaaggagatgaactgtgaccaacataaactgcgtattttcctgcttgaagtggatcgt
cagatcttggagctggaacgatgtgcgagatatatagtcacagatgaagtacacaagaga
atgttcaaggagatggaaattcacttcagaagtctggtttctcatcttagaaatacagag
tacaatgcgaagagctggaatgatgttgcaggagtgatactgaaacaccttcaaagactt
gacctactggccaccacaactaaaactattctaaactag
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