Ictalurus punctatus (channel catfish): 108256869
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Entry
108256869 CDS
T04658
Symbol
gabrr1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108256869 (gabrr1)
04082 Neuroactive ligand signaling
108256869 (gabrr1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108256869 (gabrr1)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
GABA-A
108256869 (gabrr1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
108256869
NCBI-ProteinID:
XP_017309585
Ensembl:
ENSIPUG00000009965
UniProt:
A0A2D0PWT0
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Position
2:complement(4272869..4286886)
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AA seq
475 aa
AA seq
DB search
MRADWLALLCVALLGACRTEAVMRGRKLHTCSQLRSRRDATRTEEGIHKSGSPILKRSPD
ITKGSVPKSEHLLRIDDHDFTMRPGFGGPAIPVGVDVQVESLDTISEVDMDFTMTLYLRH
YWKDERLSYPGKTNQSMTFDSRLLKKIWVPDMFFVHSKRSFIHDTTMDNVMLRVYPDGKV
LYSVRVTVTAMCNMDLSHFPLDTQTCSLEIESYAYTDDDLMLYWKKGNDSLKTDDKISLS
QFLIQEFHTTTKLAFYSSTGWYNRLYITFTLRRHIFFFLLQTYFPATLMVMLSWVSFWID
RRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVN
YLSTLQERKERKFRERLPCTCGMSHAGHVMMSSSYSEMDTMTTGHYGMSEVNGDKREHML
VRLAMDKEQGIHGRAGKTRSYSSLWIDTHAIDKYSRVIFPGAYTLFNIIYWSIYS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcggactggctcgcgctgctctgtgtggcgctgctgggcgcgtgccgcaccgag
gctgtaatgagagggcgaaaacttcacacctgcagccagctcagatcccggagagatgct
acaagaacagaggaaggaattcacaagtctggaagtcccattctaaaaaggagccccgac
atcacgaagggctcggtcccgaaatccgagcacctcctcaggatcgatgaccacgatttc
acaatgcggcctggctttggaggcccagcaattcctgtgggcgtggatgtgcaggttgaa
agcttggacactatctctgaagtggatatggacttcaccatgactctgtacctgaggcac
tattggaaagacgagcgcctgtcctacccaggcaagaccaaccagagcatgacttttgat
agccgcttactaaagaagatctgggtccctgacatgttcttcgtccactccaaacgttcc
ttcatccacgatacaacaatggacaacgtcatgctcagggtgtatccggacggcaaagta
ctctatagtgtcagggtcacagttacagctatgtgtaacatggacctcagccactttcca
cttgacacccagacatgctcgctggagatcgagagctatgcgtacaccgacgacgatctg
atgctgtactggaagaaagggaacgactctctgaagacagatgacaagatctcactctct
cagttcctcattcaggagtttcacaccaccacaaaactggctttctacagtagcacgggt
tggtacaaccgtctttacatcacgttcaccctgagacgtcacattttcttcttcctgctg
cagacctactttcccgctactctgatggtcatgctgtcctgggtgtccttctggatcgac
cggcgcgctgtccctgccagagttcctcttggaatcactacggtgctcaccatgtccacc
atcatcacaggtgtgaatgcctccatgcctcgagtgtcctacatcaaagctgtggacatc
tacctgtgggtcagcttcgtcttcgtcttcctttccgtcctcgagtacgcagctgtcaac
tacctgtccactctgcaggaacgtaaggagaggaaattcagagagaggctgccgtgcacg
tgcgggatgtctcatgcgggccacgtgatgatgagcagcagctacagcgagatggacacc
atgaccacgggtcattacggcatgtctgaggtgaacggagacaagcgggagcacatgctg
gtgcggttggccatggacaaggagcagggcattcacggccgagctggaaagactcgctcc
tacagcagcctctggatcgacacccacgccatagacaagtactcacgtgtgatcttccca
ggagcttacacgctcttcaacatcatatactggtccatttattcctaa
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