Ictalurus punctatus (channel catfish): 108256871
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Entry
108256871 CDS
T04658
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03320
PPAR signaling pathway
ipu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108256871 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
108256871 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108256871 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108256871 (slc27a1a)
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108256871 (slc27a1a)
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
108256871 (slc27a1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108256871
NCBI-ProteinID:
XP_017309586
Ensembl:
ENSIPUG00000006790
UniProt:
A0A2D0PVY6
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All DBs
Position
24:complement(18561007..18575963)
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AA seq
643 aa
AA seq
DB search
MRYAVSLGSLGLLRLLGAPWSWSVAAGLGLYLGSGGWRYLYVAARTAKRDLNGVLMLLRV
KLALWRHTRNGSTIPSIFAQTVAQHPDKPALVYEATGETWTFSELDRLSNGVAQWALSQG
WGTGDVVALLMESRPLQVALWLGLAKVGIESALINFNLRRDSLMHCLGVSGARALVFGAE
LADAVSEVSSSLSESLALFWTGDPSPDHMTSLKAQPFDTLLASAPRHPPSCTPSKGFNDR
LFYIYTSGTTGLPKAAIVVHSRYYRMAAFVYYAFGMKRDDILYDCLPLYHSAGNIIGVGQ
CLLNGLTVVVKKKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSERGHRVRLAVG
NGLRPSVWEAFTQRFGIKQIGEFYGATECNCSIANMDAKVGSCGFNSMILPNVYPIRLVK
VNEETMELVRNKDGLCVPCQPGEPGLLVGKINQQDPLRRFDGYANQEANKKKITCNVFKK
NDSAYLSGDVLVMDELGYMYFRDRSGDTFRWKGENVSTTEVEGTLSSLLGQTDVAVYGVT
VPGVEGKAGMAAIADSAGNFNCESFLREVQKVLPPYARPVFLRISPQVDTTGTFKIQKTR
LQKEGFDPRSTADRIYFLNSRAGRYEAVTEEMYNALVEGRIPL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatgccgtgtctctcggctctctcggcctgctccggctgctcggcgcgccgtgg
tcgtggagcgtggccgctggactcggcctgtacctaggctccggtggctggaggtacttg
tacgtggctgcgcgcaccgccaagagggacctcaacggtgtgctgatgctcctgagggtg
aagctggcgctgtggcgtcacacgcgtaatggcagcaccatcccctccatcttcgcccag
accgtcgctcagcacccagacaaacccgctctggtgtacgaggccaccggggaaacgtgg
accttctctgagctcgaccggctgagtaacggcgtggctcagtgggctctgagtcagggc
tgggggacgggggacgtggtggctctgttgatggagagcaggcctctgcaggtggcgctg
tggctcggcctggccaaagtcggcatcgagtcggcgctcatcaacttcaacctgaggcga
gattcccttatgcactgcctgggcgtgtcgggagcacgggcgctcgtctttggggcggag
ctcgctgacgccgtgtcggaggtaagctcctctctgagcgagtctttggctctcttctgg
accggagacccgagtcctgatcacatgacctctctgaaagcgcagccattcgacactctg
ctggcgtctgcaccacgccatcctccttcctgcaccccatccaagggcttcaacgaccgt
ttgttctacatttacacctctggtaccaccggacttcccaaagctgctatcgtggtgcac
agtcgatattatagaatggctgcttttgtttattatgctttcggcatgaagcgagacgac
atcctgtatgactgcttacctctctaccattcagcaggtaatataattggtgtcggtcag
tgtttactcaacggactgactgtggtggtgaagaagaagttttcagccagccgcttctgg
gaagactgcatcaaatacaactgtacagtggtgcagtacatcggcgagatctgccgctac
ctgctgtctcagcctgtgcgcccgtcagagcgtgggcaccgtgtgcgcctggcagtgggt
aacgggctacgccccagcgtgtgggaggccttcactcagcgcttcggcattaaacagatc
ggcgagttctacggagccaccgagtgtaactgcagcatcgccaacatggacgccaaggtg
ggatcgtgtggttttaacagcatgattctgcccaacgtctaccccatccgcctagtgaag
gtaaacgaggagaccatggagctggtgaggaataaggacggactttgtgttccatgtcag
ccaggagaacccgggctgctggtgggcaaaatcaaccagcaggatcctctgcggcgcttt
gacggctacgccaatcaggaggccaacaagaagaagattacctgcaatgttttcaagaaa
aacgactccgcctacctgtcaggtgatgtattggtgatggatgaattgggctacatgtac
ttccgggaccgcagtggggacacgtttcgctggaaaggtgaaaacgtctccactactgaa
gtggaaggaaccctgagcagtctgctgggccagacggatgtggcagtgtacggagtcact
gtgccaggtgtggagggaaaagcggggatggctgctatcgctgactccgcagggaacttt
aactgtgaatcctttctccgagaagtccagaaggtgttgcctccatacgctcgaccagtt
tttctccgcatctccccacaagtagatactacaggtacatttaaaattcagaagaccagg
ttacagaaggagggatttgacccccgtagcacagcggaccggatctactttctgaactcc
agagcggggcgttacgaagccgtgaccgaggaaatgtataacgctttagtggaaggtagg
attcctctgtga
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