Ictalurus punctatus (channel catfish): 108256943
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Entry
108256943 CDS
T04658
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04136
Autophagy - other
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108256943
04136 Autophagy - other
108256943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108256943
03029 Mitochondrial biogenesis [BR:
ipu03029
]
108256943
Membrane trafficking [BR:
ipu04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
108256943
Mitochondrial biogenesis [BR:
ipu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108256943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
108256943
NCBI-ProteinID:
XP_017309742
Ensembl:
ENSIPUG00000017786
UniProt:
W5UBV7
LinkDB
All DBs
Position
24:complement(6593149..6603195)
Genome browser
AA seq
425 aa
AA seq
DB search
MNLASQSGEAGCSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGSKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQREKPQEEPTTWTGYFGKVLMASTTYLPAQVSEMFTQGR
AFATVRLPFSGHKNICALAIIQKIPRLLVAASDGYLYLYNLDPQEGGECTLMKQHKLDGS
AEAANEILEQTSHERPLVAQTYSTAIAKGYPEDQGAVGGAGVEDDMNALHLDEENEQPPL
ILETD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggccagtcagagcggagaggccggctgtagccagctgctcttcgccaacttt
aaccaggacaacacgtccttagcagttggtacgaaatctggatacaagtttttctctttg
tcctcggttgacaaattggaacagatctatgaatgtactgacacggaagatgtgtgtatt
gtggaaagactgttctccagtagccttgttgctattgtgagccttaaggcacctaggaag
ctcaaagtgtgtcatttcaagaagggaacggagatctgtaactacagctactcgaacact
atactggctgtaaaactgaacagacagaggttgatagtatgtctggaagaatcactgtat
atccacaacatcagggatatgaaagtactgcacaccattcgagagactcctccgaatcca
tcaggattatgtgccctctctataagtaacgacaactgctacctggcgtatccaggaagt
gcaacaataggggaagtgcaggtttttgacactgtcaatctgagggccgctaatatgatc
cccgcccacgacagcccgttagcagcactggcttttgacgcaagcgggtcgaaactcgcc
acggcttctgagaagggaaccgtcattcgcgtgttctccattccagaaggccagaagctc
tttgagttcaggaggggagtgaagagatgcgtgagtatctgctccctggccttcagtatg
gaaggactttatctgtctgcctctagcaacaccgagacggttcatatctttaagctggag
acgcagagagaaaagccgcaggaggaacccactacttggacaggttacttcgggaaagta
ctgatggcctccacaacgtatctgcctgcgcaggtgtccgagatgttcacacaaggacgg
gcctttgctacagtcagactgccgttttcaggacacaagaacatctgcgctctagccata
atccagaagattccacgtcttctggttgcggcgtcagacggctacctttacttgtacaac
ctggacccacaggaggggggagaatgcacactgatgaagcagcacaagttggatggaagc
gctgaagctgcaaatgaaattctagagcagacgtcccacgagcgcccgctggtggcacag
acctacagcactgccattgccaaaggttaccctgaggatcagggagcagtgggcggagct
ggtgtggaggacgacatgaacgctctgcacctggacgaggaaaacgagcagcctccgcta
atcctggagacggactga
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integrated database retrieval system
