Ictalurus punctatus (channel catfish): 108256944
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Entry
108256944 CDS
T04658
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
ipu04517
IgSF CAM signaling
ipu04530
Tight junction
ipu04810
Regulation of actin cytoskeleton
ipu05100
Bacterial invasion of epithelial cells
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108256944 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108256944 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
108256944 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108256944 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108256944 (arpc1b)
05100 Bacterial invasion of epithelial cells
108256944 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108256944 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108256944 (arpc1b)
Membrane trafficking [BR:
ipu04131
]
Others
Actin-binding proteins
Arp2/3 complex
108256944 (arpc1b)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
108256944 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
EIF3I
eIF2A
PEP5_VPS11_N
Beta-prop_EIPR1
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
108256944
NCBI-ProteinID:
XP_017309743
Ensembl:
ENSIPUG00000017735
UniProt:
W5UTS2
LinkDB
All DBs
Position
24:6584981..6593132
Genome browser
AA seq
359 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHDVHIYKKEGNSWNKIHVLKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGDVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQENDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKP
APTPWGSKMPFGEVMFESSGTAGWVHGVSFSESGNRVAWASHDSTVAMAEGGKTAVITSL
ASETLPLLCVTFTSENSLVAAGHDCYPVLFVYDAGKGALSFGGKLDIPKQSAQKGMTARE
RFQNLDKKATTDTKEAVLDSLHKNSISQISVLAGGKAKCTKFCTTGMDGGMAIWDLKTA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcatagctttctgctggagcccatcagctgccacgcctggaacaaggatcga
actcaaattgcactgtgccccaataaccatgatgtccacatctataaaaaggaggggaat
agctggaacaagatccatgtgctaaaggagcacaatggccaagtcactggtatcgactgg
gcaccggagagcaaccgcatcgtgacctgtggcactgaccgcaacgcttacgtgtggacc
ctgaagggtgatgtgtggaagcccactctggtcatcctgaggataaaccgcgctgcccgc
tgtgttaagtggtcacccaaggaaaacaagttcgctgtagggagcggctcccgcctcatc
tctgtctgctacttcgagcaggagaatgactggtgggtgtgtaagcacattaagaagccc
attcgctctactattctgtgcctggactggcaccccaacaacgtcctgctggctgctgga
tcctgtgattttaaatgcaggattttctccgcttatatcaaagaggtggaggagaagcct
gctccaactccatggggctccaagatgccattcggagaggtgatgttcgagtcgtctggc
accgcgggctgggtgcacggggtttctttctccgagagcgggaatcgtgtggcctgggct
agtcacgacagcacggtcgctatggctgaaggaggcaagactgctgtaattaccagtctg
gcttcggagacccttcccctgctgtgtgtgaccttcaccagcgagaacagtttagtggca
gcgggtcacgactgttaccctgtgctgtttgtctacgatgctgggaagggtgctctgtct
ttcggagggaaacttgatatccccaagcagagcgctcagaaaggaatgactgccagggag
cgcttccagaacctggacaagaaagccacgacggacaccaaggaggccgtgctggactcg
ctgcacaagaacagcatcagtcaaatctcagtgcttgctggagggaaagcgaagtgcact
aaattctgcactactgggatggatggaggaatggccatttgggatctaaagaccgcttaa
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