Ictalurus punctatus (channel catfish): 108256950
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Entry
108256950 CDS
T04658
Name
(RefSeq) cartilage matrix protein isoform X1
KO
K19467
matrilin
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108256950
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
108256950
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
EGF
EGF_LRP2
EGF_3
Plasmod_Pvs28
Copine
hEGF
Dabb
WipA_N
Motif
Other DBs
NCBI-GeneID:
108256950
NCBI-ProteinID:
XP_017309750
Ensembl:
ENSIPUG00000020337
UniProt:
A0A2D0PXB2
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All DBs
Position
24:complement(9662556..9668854)
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AA seq
486 aa
AA seq
DB search
MPLLGFVMLLCILGAQATVDHPYAAAMAPGACKTKPIDLVFIIDSSRSVRPAEFEQVKVF
LNKIIEGLDVGPDATRVSVVNYASKMKNEVSLKSYKAKPALMKAVSKIEPLSSGTMTGLA
IQFAMNVAFSEAEGARIKPSDIRKVAIIVTDGRPQDNVSAIAAKARDAGIEIYAIGVGRV
DMNTLKQMASEPLDEHTDYVESYGFIEKLTQKFQEAFCVSDLCATGDHDCEHICISVPGS
FKCACREGYTLKEDGRSCTGCNDAATDLVFLIDGSKSVRPENFELVKKWIMTIVDKLDVS
DKNTHVGVVQYSSAVKQEFPLALYNSKKGIKEAVKKIHYMEGGTMTGQAINYMVDKSFST
AHGARPGAAKVGIVLTDGRSQDYIGDAARKAKESGLKMYAIGVGSAVEDELKLIASDPEN
YFYTADFKAIKEIGTKLQINTCIVKDPCECQSLMNFQKKVEEALQALTKKLEGVTKRLTA
LENKIV
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgctagggtttgtgatgctactgtgcatcttgggagctcaagctacagtggac
catccatatgctgctgccatggctccaggagcatgtaagaccaagcctattgacctggtg
ttcatcatcgacagctctcggagtgtacggcccgctgagttcgagcaggtcaaggtgttc
ctcaataagataatagagggtctggatgtggggcctgatgccacacgcgtgagtgttgtg
aactatgccagcaagatgaagaatgaggtgtcattgaagtcctacaaggcaaagcctgca
cttatgaaggctgtatcaaagattgagccactttcctctggcaccatgactggcttggcc
atccagtttgccatgaatgtggctttcagcgaggcagagggtgcacgcatcaaaccctct
gatatcaggaaggtagcaatcattgtgacagatgggcggccacaggacaacgtgagtgcc
attgcagcaaaggcacgggacgcaggcattgagatatatgccatcggtgtgggccgagtg
gacatgaacacgctgaagcagatggccagtgagcccctggatgagcacactgattacgtg
gagagctatggcttcattgagaagctcacccagaagttccaggaagccttttgtgtgtcc
gacttgtgcgcaacaggtgatcatgactgtgagcacatttgcatcagcgtgcctggatca
ttcaagtgtgcctgccgagagggctacacactcaaggaagatggtcgttcctgcactggc
tgcaatgatgctgccacagatttggtcttcctgatcgacggatcaaaaagtgtgaggcca
gagaactttgagctggtgaagaagtggatcatgacgatcgtggacaagctggatgtgtca
gacaaaaatacccatgtgggtgtagtgcagtactctagtgctgtcaaacaggagtttcct
cttgcactgtacaactccaagaaaggcatcaaagaggctgtgaagaagattcactacatg
gagggtggaaccatgactggacaggctatcaattacatggtggacaaaagcttcagcact
gcccatggtgccaggcccggggcagccaaggtgggcatcgtcctcactgatggcaggtca
caagactacattggagatgctgcaagaaaggccaaggagagcggattaaagatgtatgct
ataggagtcggaagcgcagttgaggacgagttgaaattaatcgcctctgatcctgaaaat
tatttctatactgctgacttcaaagccataaaagagattggcacaaagctgcaaatcaac
acttgtatagttaaggatccctgtgaatgtcagtctcttatgaatttccagaaaaaagtg
gaagaggcactccaggcattaacaaagaaattggagggagtaacaaagaggctcactgct
ctggaaaacaaaatcgtgtga
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