Ictalurus punctatus (channel catfish): 108256978
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Entry
108256978 CDS
T04658
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108256978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108256978
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108256978
03012 Translation factors [BR:
ipu03012
]
108256978
04131 Membrane trafficking [BR:
ipu04131
]
108256978
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108256978
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108256978
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108256978
Translation factors [BR:
ipu03012
]
Eukaryotic type
Elongation factors
108256978
Membrane trafficking [BR:
ipu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108256978
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108256978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
108256978
NCBI-ProteinID:
XP_017309806
Ensembl:
ENSIPUG00000019880
UniProt:
A0A2D0PWL2
LinkDB
All DBs
Position
24:complement(9376825..9381151)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEITKEVGAYIKK
IGYNPAAVAFVPISGWHGDNMLEPSTNMTWFKGWKIERKEGAANGTTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGMLKPGMVVTFAPVNVTTEVKSVEMHHESLA
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQQAGNFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKNLKSGDAAIILMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKAVDKKASTAGKVTKSAQKAAKSK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaagacccacatcaacatcgtggttattggccatgtcgactccggtaaa
tccaccaccaccggccacctgatctacaaatgcggaggaatcgacaagagaaccattgag
aaatttgagaaggaagcagctgagatgggcaaaggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccattgatatctctctttggaagttt
gagaccagcaagtactatatcaccatcatcgatgcccctggacacagagacttcatcaag
aatatgatcactggtacctcacaggccgattgtgctgtgctgatcgttgctgccggtgtg
ggtgagtttgaggctggtatctccaagaatggacagacccgtgagcatgccctcctggcc
ttcaccctgggagtgaagcagcttatcgttggagtcaacaagatggactccaccgagccc
ccatacagccaggctcgctttgaggagatcaccaaggaagtcggcgcttacatcaagaag
attggctacaaccctgctgccgttgctttcgtcccaatttctgggtggcatggagacaac
atgctggagcccagcacaaacatgacatggttcaagggatggaagattgaacgtaaagaa
ggtgctgccaacggaacaactctcttggaggccttggactccatcctgcccccctcccgc
cccactgacaagcctctccgcctgcccctgcaggacgtctacaagattggaggtattgga
actgtacctgtgggccgtgtcgagactggtatgcttaagcctggcatggttgtgaccttt
gcccctgtcaatgtgaccactgaggtcaagtctgttgagatgcaccatgagtctttggct
gaggctttgcctggtgacaacgttggcttcaacgtgaagaatgtgtcagtgaaggacatc
cgtcgtggtaatgtggccggagacagcaagaacgacccaccccagcaggctggcaacttc
acagctcaggtcatcatcctgaaccaccctggtcagatctctcagggctacgctcctgtg
ctggactgtcacactgctcacattgcctgcaagtttgcggagcttaaggagaagattgac
cgtcgttctggcaagaagcttgaagacaaccccaagaacctgaaatctggagatgctgcc
atcatccttatgatccctggaaaacctatgtgtgtggagagcttttctcagtacccacca
ctgggtcgttttgctgtgcgtgatatgaggcagaccgttgctgttggtgtcatcaaagct
gttgacaagaaagcctctacagctggcaaggtgaccaagtctgctcagaaggctgcaaaa
agcaaatga
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