Ictalurus punctatus (channel catfish): 108257003
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Entry
108257003 CDS
T04658
Symbol
notch3
Name
(RefSeq) neurogenic locus notch homolog protein 3 isoform X1
KO
K20995
Notch 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04330
Notch signaling pathway
ipu04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108257003 (notch3)
04371 Apelin signaling pathway
108257003 (notch3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
NOD
EGF_3
Ank_3
Ank_4
Ank_5
EGF_Teneurin
cEGF
DUF7472
Motif
Other DBs
NCBI-GeneID:
108257003
NCBI-ProteinID:
XP_017309845
Ensembl:
ENSIPUG00000005680
UniProt:
A0A2D0PXK5
LinkDB
All DBs
Position
24:18073473..18110512
Genome browser
AA seq
2456 aa
AA seq
DB search
MDKMSTNMRDYRFWVVLSVLGLVQMSEGLHCLDSQRPCENGGRCIDSRCMCRPGYIGPLC
QHLDPCHRSPCHNGAACKSQVANGIPQYTCVCQRGFRGQDCSLIDACATSPCANGARCTN
WNNHYNCSCPPGFQGKNCRNDIDECRKPGKCLNGGMCVNTHGSFLCECLPGYSGRTCEVL
TQPCAPSQCLNGGTCHQTGDHTYECACLPGFSGLNCEVNVDDCPGHKCMNGGICVDGVNT
YNCQCPPEWTGQYCAEDVNECLMQPNACHNGGTCFNTNGGHTCVCVNGWTGNDCSENIDD
CATAVCFNGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAIC
TCPAGFVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYTGPRCEIDINECLS
MPCQNDATCLDRIGQFSCICMPGYAGTHCEVDIDECESNPCVNDGICRDLVNGFTCKCQP
GFTGTMCQIDIDECASTPCQNGAKCIDRPNGYECRCAEGFEGRLCESNIDNCQPDPCHHG
TCIDGIASYTCNCVPGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNC
EINFDDCASGPCDYGICKDGINRYDCVCKPGFTGPKCNVEVDECSSNPCRNGGTCVDEEN
GFHCLCPAGFHEPYCYSHVDVCSNSPCVHGNCREDPNGYRCDCEPGWTGKNCDLDRNDCV
PSPCQNAGTCIDQLNGFTCKCHQGFRGNLCQENINECASSPCLNHGTCVDGVASFTCRCE
PPYSGPTCAEEPCEPNPCANNAACIHSLDYLGFKCTCPPGWQGQLCNVDVNECSSNPCKN
RGTCTNTLGGYVCSCRNGYTGPNCETDINDCLPNPCLSGGSCTDGINTFYCTCLPGFTGP
RCAIEVNECQSSPCKNGGTCTDYVNSYTCACKPGFTGLHCETNIPECTESSCFNGGTCVD
KINGFSCTCRSGFTGDHCQYEVNECDSQPCLNGGACHDGVKTFRCSCSKGYTGNRCQMPV
DWCRRSNPCQNGGRCRPKDGSFTCDCVGSWSGRYCDVPGVSCEVAAFQRGLQTDELCDHG
GHCVNAGSTHYCKCPTDYTGSYCESQVDHCEDKPCLNGATCRGYVGGYTCDCLPGYDGQN
CEREINECRSHPCQNGGTCIDLVGHYICSCPPGTRGVLCEINEDDCATPTWSRGTPKCQN
NGTCVDRVGGYRCNCPPGFTGERCEGDINECRSNPCNPANSLDCIQLPNDYQCVCKPGFT
GQGCQNRFGVCDLQPCKNGGVCSVSSGSPVGYSCTCQLGYTGLNCERSMSCRELSCYNGG
SCTLTPRGARCSCPQGYVGTQCQERANESCLSKPCRNGGVCREEVSFPFFSCQCLPGWRG
KRCEQESRMSVPVCPVPDCHGKANDGVCDKECNSFACHWDGGDCSLAVNPWAHCVDPHCW
RVFNNSQCDETCNTAECLYDNFDCRIKEKVCNPIYETYCMDHYADGRCDQGCNNEECGWD
GLDCARTVPEDLAKGVLVIVVLLPPDELLRTGTAFLQKLSSILRTSLRFRLDHNGDAMIK
PYTRREARLKRELQPHNEVIGSIVYLEIDNRLCSQDSDNCFPTAESAADYLGALSAREML
GKFPYPLKEVRSEQIHDSNEVPQWGKLLLVGVAVLFLMVIMVVGMLIARRKREHSTLWFP
EGFFLKKDTSSNKNRREPVGQDALGMKHMPKTVEESLLGDHSDQWIDADCPEAKRLKVEE
PSILSDSEDAVDSRQWTQHHLAAADIRMPPSMALTPPQGEFDGDCMDVNVRGPDGFTPLM
LASFCGGGLEQEVAEEDDSEESSANIISDLIYQGASLGAQTDRTGETALHLAARYARADA
AKRLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRTRATDLDARMYDGSTALILAA
RLAVEGMVEELITCHADVNAVDEIGKSALHWAAAVNNVEATIALLKNGANKDMQDLKEET
PLFLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVRSPQ
SHAGAGHHLTGGHALSPLMCPPGSFLPSLKNTPQGKKNRRPGAKGIGGQHGSSLKDAAKA
RNKKLTLDMQSALLDSSVTLSPVDSLDSPRGGASNAGYVTNPASPAAMPSPGIFHSMPST
PMVHSGMMDAGGPFTVSLAGLNELSQATHTYALNPGQMNLGMGLVSPVSVPFDWHSRAPQ
TPQCTQPMVNMVHPGTPGAMQPAAVLMHQQQVFRNTQQPPMLQPTPVSSTPTISPVKLPS
IAEQQQQQQLHAHSLTNQQALASLGASTPPTPQPPQPFYQQPQQSQAQSQQPQQQPPQTK
AVPQSQAAPPQVSQAPPVQASSSTTSAGLEDYPTPPSQRSYTSAIDATPKHYLHVPSEHP
YLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVSAPASSHTQIPHASESSGKMQVFA
NT seq
7371 nt
NT seq
+upstream
nt +downstream
nt
atggataagatgtccacaaatatgagggattacagattttgggtagtgctgtcagttttg
ggtctcgtgcagatgtctgaaggactgcactgcttggactcacaaagaccatgtgaaaat
gggggaaggtgtattgactcgagatgcatgtgccggcccgggtacattggaccgctgtgc
caacacctagacccatgccaccgctcgccatgccataacggagccgcctgcaaaagtcaa
gtggcgaatggtataccgcagtatacctgtgtatgccagagaggctttagaggtcaggac
tgctctctgatcgatgcctgcgccacaagcccatgtgctaacggtgcccgctgcaccaac
tggaataaccactacaactgttcgtgcccacccggcttccagggcaagaactgccggaac
gacatcgacgagtgccgcaagccgggaaagtgcctgaacggaggcatgtgtgtgaacaca
catggctcgtttctctgcgagtgtcttcctggctacagcgggcgcacgtgtgaggtgctt
actcagccctgcgcgccatctcagtgcctcaacggggggacctgccatcaaactggggac
cacacttatgaatgcgcttgcctgccaggattcagtggccttaactgtgaggtcaatgtg
gatgactgtcctggccacaagtgcatgaatggtgggatttgtgtagatggagtcaacacc
tacaactgccagtgcccacctgagtggacaggtcagtactgtgccgaggacgtaaacgag
tgcttgatgcagccgaacgcctgccacaacggtggcacgtgcttcaacaccaatggcggc
cacacgtgtgtgtgcgtgaacggatggaccggcaacgactgcagcgagaacatcgacgac
tgcgccactgccgtgtgctttaatggagctacatgtcatgaccgtgtggcgtctttcttc
tgcgagtgtccagtgggcaaaactggtctgctgtgccacctggatgatgcctgcgtcagt
aacccctgcaacgaaggtgccgtgtgcgacaccaaccctctgaacggccgtgccatctgc
acatgcccggccggctttgtcggtggagcgtgtaaccaggacatggatgagtgttccatc
ggtgccaacccatgcgagcactttggaaagtgtgtgaatacagagggatcgttccagtgc
cagtgtggccgtggctacaccggccctcgctgtgagattgacatcaacgagtgtctgtcc
atgccctgccagaatgacgccacctgcctcgaccgcatcggacagttctcctgtatctgc
atgcccggctacgctggaacacactgcgaggtagatatagacgagtgcgagagcaatccc
tgcgtaaacgacggcatctgcagagacctggtcaacggtttcacctgcaaatgccagcca
ggcttcactggcaccatgtgccagatcgacattgacgagtgtgccagcacaccttgccag
aacggagccaagtgcatcgacaggcccaacggttacgagtgccgctgtgctgaagggttc
gagggtagactctgtgaaagcaacatcgataactgccagcccgacccgtgccaccacggc
acctgcatagacggcatcgccagctacacctgtaactgcgtgccaggctacacgggctac
cggtgtgagaaccaactcaatgagtgccatagtaacccctgtcaaaacggcggcaagtgc
gtggacctggtcaacaaatacatctgccagtgccagcacgggacctcaggcaccaattgt
gaaatcaactttgatgactgcgccagcggcccatgtgactacggcatctgcaaggacggt
ataaaccgttacgactgtgtgtgcaaacctggcttcactggtccaaagtgtaacgtggag
gtggacgagtgctcgtcgaacccgtgtcgtaacggaggcacctgcgtggacgaggagaac
gggttccactgtctttgtcctgccggctttcatgagccttactgctactctcatgtggac
gtgtgcagcaacagcccgtgcgtgcatggaaactgcagagaagatcccaacgggtatcgc
tgtgattgtgagcctggatggacaggaaagaactgtgatctggatcgtaacgactgtgtg
cccagcccgtgtcagaacgccggcacctgcattgaccagctcaacggtttcacctgtaaa
tgtcatcagggcttcagaggtaatctgtgtcaggaaaacataaacgagtgtgcgtccagc
ccctgtctgaatcacggaacctgtgtggacggcgtggcgagtttcacctgtcggtgcgag
ccaccctacagcggacccacttgtgccgaggagccgtgcgagcccaacccgtgtgccaac
aacgctgcatgcattcactccctcgactacctgggcttcaagtgcacctgcccacccgga
tggcaaggccagctgtgtaacgttgacgtgaacgagtgcagctctaacccatgcaagaac
cgtggcacctgtaccaacacgctcggaggatacgtgtgctcctgccgcaacggctacacg
ggacctaactgcgaaaccgacatcaacgactgtctcccgaatccatgtctcagcggaggc
tcctgcacggacggcattaacaccttctactgcacctgcctgcccggcttcacggggcca
cggtgcgccatcgaggtaaacgagtgccagagctctccctgcaagaacggaggcacttgc
accgactatgtcaacagctacacctgcgcctgcaagccgggtttcaccggcctccactgc
gagaccaacatacccgaatgcaccgagagttcttgctttaacggtggaacgtgtgtggac
aagatcaacggcttctcctgcacatgccgctcggggttcaccggcgaccactgccagtat
gaggtgaacgaatgcgactcgcagccctgcctcaacggaggagcgtgtcacgatggcgtg
aagacgttccgctgctcctgctccaaaggatacaccggcaaccggtgtcagatgcccgtg
gactggtgtaggcgctcgaacccgtgccagaacggtggccggtgcagacccaaggatggc
tcgttcacctgcgactgtgtgggaagctggtccggacgctactgtgacgtcccgggagtt
tcctgcgaggtggcggctttccagagaggtcttcagacggacgagctttgcgatcacggc
ggtcactgtgttaacgcagggagcacacactactgcaagtgtccgactgattacacgggc
agctactgcgagagtcaggtagaccactgtgaggacaaaccctgcctcaatggtgccacc
tgcaggggctacgtcggaggatacacgtgtgactgtttgccagggtacgatggacagaac
tgcgagagggagatcaacgagtgccggtctcacccgtgtcagaacggaggaacctgcatc
gacctggtgggccactacatctgctcctgccctcctggcacacggggcgtcctgtgcgag
ataaacgaggacgactgtgccacgcctacatggtcccgtggcaccccgaagtgccagaac
aacggcacctgtgtagaccgggtgggtggataccgctgtaactgtcctcctgggttcacc
ggagagcgatgtgagggagacatcaacgagtgccgctcgaacccctgcaacccggccaac
agcctcgactgcatccagctgccgaatgattaccagtgcgtctgcaagcccggattcaca
ggtcaaggatgtcagaacaggttcggcgtgtgcgatttgcagccttgcaagaacggcggc
gtgtgctcggtgtccagcggctctccggtaggatacagttgcacctgtcagttgggctac
accggattgaactgcgaacgcagcatgtcctgccgcgagctatcttgctataacggcggt
agctgtacgctgacaccgcgtggcgcacgctgctcgtgcccacaaggctacgtgggcaca
cagtgccaggagcgtgctaacgagagctgcttgtccaagccgtgtcggaacggtggcgtg
tgcagagaggaggtttccttccccttcttcagctgccagtgtctgccaggttggcggggt
aaacgctgtgagcaggagtctcgaatgtcggtgcccgtctgcccggtgcccgactgccac
ggcaaggccaacgacggcgtctgtgacaaggagtgcaactcgttcgcttgccactgggac
ggaggagactgctcgctggctgtaaacccgtgggcacactgcgttgacccgcactgctgg
cgcgtcttcaacaacagccagtgtgacgaaacgtgcaacacggccgaatgcctgtacgat
aacttcgactgcaggatcaaggagaaagtctgcaatcccatctacgagacgtactgcatg
gaccactacgccgacggccgctgcgatcagggctgtaataacgaagagtgcggctgggac
ggtttggattgcgctagaactgttccggaagatttggcaaaaggtgtgctggtgatcgtg
gtgctcctgccgcccgacgagctgctccgcacgggcacggctttcctgcagaagctcagc
agcatcctgcgcacgtccctccgcttccgactcgaccacaacggcgatgcgatgatcaag
ccttacacccggcgcgaggcgcggctcaagcgcgaactccagccccataacgaggtcatc
ggatcgatcgtgtacttggagatcgataaccggctgtgctcccaggactcggataattgt
ttccccacggctgaaagtgcagcagattacctgggagctctttctgctcgggaaatgctc
gggaaattcccttatccgctcaaagaagtccgcagtgagcagatacatgactcgaacgag
gtgcctcaatggggaaagctgcttctggttggcgtcgcagtgctcttcctgatggtcatc
atggtggtgggaatgctgattgccaggcgcaaacgtgaacacagcacgctctggttcccc
gaaggcttcttccttaagaaggacaccagcagtaacaagaaccgcagagaacctgtggga
caggacgctctgggcatgaagcacatgccaaagacggtggaagagtccttactgggagac
cacagtgaccagtggatagacgcagactgccccgaggccaagagactgaaggtggaggag
ccgagtattctgtcagacagcgaggacgctgtggacagcaggcagtggacgcagcaccac
ctggcggccgcagacatccgcatgccaccgtccatggccctcacacctccgcagggcgaa
ttcgacggcgactgcatggacgtcaacgtgcgaggaccagatggattcactccactgatg
ctggcttcattctgcggtggaggactcgagcaggaagtggctgaggaggatgactctgag
gagtcttcggctaacatcatatcagaccttatttaccagggggcgtcactgggtgcccag
accgaccggaccggagaaacagctcttcacttggccgcccgctacgctcgcgccgacgct
gccaaacgcctgctggacgccggagctgacgccaacgcgcaggacaacacaggccgcaca
cctctacacgctgccgtggctgccgatgctcagggtgtcttccagattctgatcaggaca
cgggcgacagatttggacgcacgcatgtacgacggctccacagctcttatcctggctgct
cggttggcggtggagggcatggtggaggagctcatcacctgccacgctgatgttaacgct
gttgacgagatcggtaaatctgcactgcactgggctgcagctgtgaataatgttgaagcc
accatcgccttgttgaagaacggagccaataaagacatgcaagaccttaaggaggagacg
ccactcttcttggctgcgagggagggcagctgtgaggcagtgaaggtgctgttggcccat
ttcgccaaccgtgagattacagaccacatggaccggctgcctcgcgacatcgctcaggag
cgcatgcaccacgacatcgtgcagctgttggatgagtacaacaccgtgcgcagcccgcag
agccacgccggcgcaggacaccacctaacaggcggccatgcgctctcgccactcatgtgt
ccaccgggcagcttcctgcctagtctgaaaaacacgccgcagggcaagaagaaccgccgg
ccaggcgccaaaggaataggcggacagcacgggagcagtctgaaggatgccgcgaaggca
cggaacaagaagctgacactggacatgcagagtgcactgctggacagttcagtgacgctg
tcgcctgtggactcgctggactcgccacgtggtggcgccagtaacgccggctatgtcact
aacccagcgtctccagctgctatgccctctccggggatcttccactcgatgcccagtact
ccaatggtgcacagtggtatgatggatgctggtggtcctttcacggtttccttagccggc
ttgaacgagctgagtcaagccacccacacctacgccctcaacccaggccagatgaacctg
ggcatgggcctggtgagccccgtgagcgtgccgttcgactggcacagccgtgcgccacag
accccacagtgtacccagcctatggtgaacatggtgcacccaggaacacccggcgctatg
cagcctgccgctgtactcatgcaccagcagcaggtttttcgtaacacccagcagccgccc
atgttgcagcctacgccagtctccagtacgcccaccatcagccctgtcaagctgccttcc
atcgccgaacagcagcaacaacagcagctccacgctcacagccttaccaaccagcaggcc
ctggcgagcttgggtgcctcgacgcccccgaccccgcagcctcctcaacccttctaccag
caaccgcagcagagtcaggcgcaatcccagcagccacagcagcagccaccacaaacaaaa
gcagtcccacagagccaggctgctcctccacaggtctcccaggctcccccagtgcaggcc
agtagcagcaccaccagtgcaggtttggaggattaccccactcctccttcccaacgtagc
tacacctccgccatcgacgccacgcccaagcattacctacacgtacccagcgagcacccc
tacctgaccccgtcccccgagtctccagagccatggtctagcccctcccctcactgtgtt
tccgattggtctgactccaccccaagtccggcagtctccgcccctgcctcttcccacacc
caaatccctcacgcatccgaatccagtggaaagatgcaggtgttcgcgtga
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integrated database retrieval system
