Ictalurus punctatus (channel catfish): 108257077
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Entry
108257077 CDS
T04658
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108257077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108257077
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108257077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Orthopox_A49R
Motif
Other DBs
NCBI-GeneID:
108257077
NCBI-ProteinID:
XP_053531495
Ensembl:
ENSIPUG00000021211
UniProt:
A0A9F7R0N8
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All DBs
Position
24:10064486..10075826
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AA seq
571 aa
AA seq
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MNVTLAVKQYVTKMIESSGPGMKVLLMDKETTSIVSMVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKDNVENLIQELRRPKYSVYFIFFSNVISKSEVKALAEADEQEVVA
DVQEFYGDFIAVNPHLFSLNLQGVSRGRSWDPSVLPRVTQGLTSVLLALKKCPMIRYQLS
SDMTKRLAESVKQIISKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLREVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
DQQKLESIADMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERQLMEVSEVEQELACQ
NDHSNAQQYVRRVLQNPRLTELDAVRLVMLYALRYERHSSSILPSLMEELNRRGVSEKYR
KMVQAVIEYGGKRVRGSDLITPTDAVAITKQFFKGLKGVENVYTQHQPLLHDTLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFIIGGATYEEALTVYNLNRTMPGVRIVLGGTTIHNT
KSFLEEVTLAAGLRHGGDRVSHGAGRPPTRR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgactttagctgttaaacagtatgtcaccaaaatgatagaaagcagcggacca
ggaatgaaggttttgctcatggataaagaaacgaccagcattgtgagtatggtttacaca
caatccgagattctgcaaaaggaggtctacctgtttgaacggatagactcacagaaccgt
gacaacatgaaacatctgaaggccatctgcttcctgagaccaaccaaggataatgtagag
aatctgattcaggagctgcgacgtcccaaatatagcgtctactttatctttttcagcaat
gtcatcagtaagagtgaagtgaaggccttggcagaagctgatgagcaggaggttgttgca
gatgtgcaggagttttatggagatttcatcgctgtgaatcctcatcttttctccctcaat
ctacaaggagtatccaggggtcgcagttgggatcccagtgttcttccacgtgtcactcaa
ggtttgacctctgtgctgttggccttaaagaaatgtcccatgattcgttaccagctctcc
tctgacatgaccaagagactggctgaaagtgttaagcaaatcatcagcaaggagtatgaa
ctatttgacttcaggaaaactgaagttccccctcttctgctgattctggaccgaagtgat
gatgcgatcacaccccttcttaaccagtggacatatcaggcaatggttcatgagcttctt
ggcctcaacaacaaccgaatagatctgtcccgggtgcctggcatcagtaaagacctgaga
gaggtggtgctgtctgcagagaatgatgaattctatgccaataacttgtacctgaacttt
ggtgaaattggaacaaacattaaaaacttgatggaggactttcagaagaaaaagccaaag
gaccaacaaaaactagagtccattgctgacatgaaggcatttgtggataactacccgcag
tttaagaagatgtcgggcacggtgtccaagcatgtgacggtggtgggcgagttgtctcgt
ctagtcagtgagaggcagttaatggaggtatctgaggtggagcaggagcttgcatgccag
aatgatcactctaacgcccagcagtatgtgcggcgtgtgctgcagaacccacgtttgacg
gaacttgatgcggtgcgtctggtgatgctatatgctctgcgctatgagagacacagcagc
agcatcctgcccagtctcatggaagaactaaacaggagaggagtgtctgaaaaataccgc
aagatggtacaagctgtgatcgagtacggaggcaaacgggtcagaggaagtgatctcatt
actcctacagatgctgtggccatcaccaaacagtttttcaaaggactcaagggtgttgag
aatgtctatacccagcaccagcccctgctgcatgacacattggatcagctaattaaaggc
cgtttgaaggacagtcagtttccctacctcgggccgagttctctgcgagacaggccacag
gacatcattgtgttcatcatcggaggagccacgtatgaagaagcactgactgtgtacaac
ctgaaccgcaccatgccaggagttcgtattgtgcttggaggaacaaccattcacaacacc
aagagtttcctagaggaggtgacattagcagctggcttgagacatgggggagacagggtg
tcacatggagctggacgtccaccaaccaggcgctga
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