Ictalurus punctatus (channel catfish): 108257094
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Entry
108257094 CDS
T04658
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257094 (samd1a)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
108257094 (samd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SR-25
DUF755
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
108257094
NCBI-ProteinID:
XP_017310001
Ensembl:
ENSIPUG00000007676
UniProt:
A0A2D0PX50
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All DBs
Position
24:18984864..18997562
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AA seq
405 aa
AA seq
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MSEPRYREWILDTIDSLRSRKARPDLERICRMVRRRHGSEPDRTCLELEKLIQEHAVLKV
NYKGSVSYRNAAKVQRGRRRSEQAAGKKSSSSSSSSSSSSSSSCSSAACNVKRASPAELN
NSDSAQGPADDDPMEDMEDELSTTAGMDSSMDEEEEASLDAPCMQIQSSADSGISLSPVI
TDAEAEVTRGSATPSKSGSSCHSTPEKDRAAARVSPERTQTAAQRDIGSLELEAALQLAA
ICPSAQRSALTQEEEPRAGESALTPDQLLSDRTGSPHQDEAVGSDHLEEGEKRNNVDDVA
HLQGTETAKNGGMKKRGLFKAEEMAQDLLQWSVADVVSYFSAVGFPEQAVAFRTQEIDGK
SLLLMQRSDVLTGLSIRLGPALKIYEHHVKVLQRSHFQEHCDVFS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagccgaggtaccgcgagtggatcctggacacgatcgactcgctgaggtcgaga
aaagcgcgaccggacctggagcggatctgccggatggtccgcaggagacacggatcagag
ccggacaggacgtgcttggagctggagaaactcatccaggagcacgcggtgctcaaagtg
aattacaagggctcggtgtcgtatcgcaacgcggccaaagtgcagcgcggcaggcggagg
agcgagcaggcggccggcaagaagtcctcctcctcctcatcttcatcctcttcttcatcc
tcttcttcttgctcctccgccgcctgtaacgtcaagcgagcttctccggcggagctgaac
aacagcgacagcgcgcagggtcccgccgacgacgacccgatggaggacatggaagacgag
ctgtccaccacggccggcatggacagcagcatggacgaggaggaggaggccagtctggac
gctccctgcatgcagatacagagctctgccgactcgggtatcagcctgagtcctgtcatt
accgacgccgaggcagaggtgaccagaggctcggccacgccctccaagagcggctcttcg
tgccacagcaccccggagaaggaccgcgccgccgctcgagtttcccctgaacgcacacag
actgcggctcagcgagacataggctccctggagctggaagcggcgctgcagctggcagcc
atctgtccctcggcccagaggagcgcgctgacgcaggaggaggagccgagagccggcgag
agcgcgctcactcctgatcagctgctgtccgaccgcacgggctcgccgcaccaggacgag
gcggtgggatcagaccacctcgaggagggtgagaagcgcaacaacgtggatgatgtcgct
cacttgcaaggaacagaaacggccaagaacggagggatgaagaaaagagggttgtttaaa
gccgaggagatggcacaggacctgttacagtggagcgtggcggacgtggtgagctacttc
agcgccgtggggtttcctgagcaggctgtggctttcaggacgcaggaaatcgacgggaag
tccctcctcttgatgcagcgcagcgacgtgctgacaggtctgtcgatcagactcggcccc
gccctgaagatatacgagcatcacgtgaaggttctgcagaggagccactttcaggagcac
tgcgacgttttctcttaa
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