Ictalurus punctatus (channel catfish): 108257113
Help
Entry
108257113 CDS
T04658
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257113
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108257113
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108257113
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108257113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_2
Cnd1
MMS19_C
HEAT_DAAF5
ParcG
TAN
Arm
UTP20
Dopey_N
Paxt-1_C
Motif
Other DBs
NCBI-GeneID:
108257113
NCBI-ProteinID:
XP_047006634
Ensembl:
ENSIPUG00000020723
UniProt:
A0A979EBP4
LinkDB
All DBs
Position
24:complement(9876773..9931101)
Genome browser
AA seq
1552 aa
AA seq
DB search
MEENDNMDYFYQQVLQKDVSRRLQVGPDLIDYLSDPQRSWDVEQDKPRLDKTIDELTGWV
NSSNYKVALLGIDIVGAFVDRMSDHFRGYVGTVVPALVDRLGDGKDQVRDQAQTIILKMM
EEAATPMYVWERMFTGFKHKNFRSREGLCLCLVATLNAHGAQPLSLSKFVPHLCALTGDQ
NPQVRETAVTALVEVYRHVGERVRADLGKRGLPAARLQTILGRFDEVLNSGNMALSLSQD
HSFDDDDSVDGSQPSSAQAAFKVPKVPKKPADSASSSRRPSATGATKMSVSKEGAGAVDE
EDFIKAFTDVPTVQIYSTRDLEDNLNKIREILSDDKHDWDQRTNALKKVRSLLVAGAKNY
DCFYQHLRLLDGAFKISAKDLRSQVVREACITVAHLSTVLGNRFDHGAEAIVPVLFNLIP
NCAKVMATSGTAAIRIIIRHTHVPRLIPLITGNCTSKAVAVRRRCYVFLDLLLQEWQTHS
LEKHTAVLVDSIKKGIRDADSEARVEARKAYWGLRSHFPVEAESLYNSLESSYQKTLQSC
LKSSGSVASLPQSDRSSSSSQESLNRPLTSKWSAAPGRVPASSKSSGSPGSLQRSRSDVD
VNAAASAKARHSGQAGGAGRLTTALPPGTYASLDDASDKDGRLRTKQPLSTPSGISSSQV
DSRARSRTKMVSQSQRSDDSDCTPAGSRSGSPGRVLASTALSTLSTGAQRVSAAPGSQRR
SRIPRSQGCSRDSSPTRLSVAPSNVSHIYNGAKGARGSRIPRPSVSQGCSREASRESSRD
TSPVRSFTPLASRHYSRSTGTLHASDAFGAAGSGLGISQSSRLSSSVSAMRVLNTGSDVE
EALADALLLGDTRSKKKPARRRYETYGMYSDDDANSDASSACSERSYSSRNGSIPTYMRQ
AEDVAEVLNRCASANWSERKEGLMGLQALLKNQRALSRVELKRLCEIFTRMFADPHSKRE
SRGFGTAESGISSASFKVFSMFLETLVDFIIVHKADLQDWLFVLLTQLLKKMGADLLGSV
QAKVQKALDVTRESFPNDLQFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQMEPQDFV
NSSETRLAVSRIITWTTEPKSSDVRKAAQSVLIALFQLNTPEFTMLLGALPKTFQDGATK
LLQNHLRNTGGVAPAPVGSPLTRHTPRSPANWSSPLTSPTNTSQNTPSPSAFDYDTENMN
SEEIYSSLRGVTQAIQNFSVRSQEDMSEPPRKREGDGEEGGADTTDTGRTALDNKTSLLN
TMPLLSSSPRPSKEYQPGSYSDSSFGSSPFSKSLKDALDQDGESLTDDSSVDQSEVVAEL
LKELSNHSERVEERKAALCELMRLIRETQLHVWDEHFKTILLLLLETLGDGEHVIRALAL
RVLKEILNRQPWRFKNYAELTIMKTLEAHKDPHKEVVRAAEEAAAMLASSISPEQCIKVL
CPIIQSADYPINLAAIKMLTKVIERLPKEGLLQMLPEIVPGLIQGYDNSESSVRKACVFC
LVAIYAIIGEDLKPYLSQLSGSKLKLLNLYIKRAQSGSSGSDQSSDVGGQGL
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatgacaacatggactatttttaccagcaagttctgcagaaggatgtgagc
cggcggctgcaggtcggtcccgacctcatcgactacctgagcgacccgcagcgatcctgg
gacgtggagcaggacaaacctcgcctggataaaaccatagacgagctgacaggctgggtc
aactccagcaattacaaggttgcattgctggggattgacattgtcggtgcgttcgtcgac
cggatgagcgatcactttcgaggttatgtaggcacagtggtccctgcgttagtggatcgt
ctgggtgatgggaaagatcaggtacgagatcaggcacagacaatcattctcaagatgatg
gaagaggcagccacgccaatgtatgtttgggagaggatgttcactggcttcaagcacaag
aacttccgaagcagagaaggactgtgtctgtgcctggtcgccacactcaacgcgcacggt
gcccagccattgagtctgagtaaatttgtaccgcatctgtgtgcactaacaggagaccag
aaccctcaagtacgggagacggctgtaacagctctggttgaggtgtatcggcatgtaggt
gagcgagtgagggcagacctgggcaagagaggactgccagctgcacgattgcagacaatt
ttaggccggtttgatgaagtgttgaattcgggaaacatggctctcagcttgagtcaagat
catagctttgatgacgatgactcggtggatggtagccagccctcgtcagcccaggcagct
ttcaaagtccccaaagtgccgaagaaacctgcagattcagccagcagctctagaagaccc
agtgctactggagccaccaaaatgagtgtatctaaagaaggagctggagctgtagatgag
gaggactttattaaagcattcacagatgtccccactgttcagatctactccacgcgtgat
ctggaggataatctgaacaagatccgagagattctctctgatgataaacatgactgggat
cagagaactaatgcattgaagaaggtccgatctctgctggttgcaggggcaaaaaactat
gactgtttctaccagcacctgcgcctgctggacggagcgtttaagatttcagcgaaagac
ctgcgatcgcaggtggtgcgagaggcctgcatcactgtggcgcacttatccacagtgttg
gggaataggtttgaccatggagcagaggccatcgttcctgtgttgtttaatcttattccc
aactgtgcaaaagtaatggcgacttctggcacagcagcaattcgcatcattatacggcac
acgcacgtgccacggctgattcctctcatcacaggaaactgcacatcaaaagctgtggct
gtaaggagacgctgttatgtgttcttggatctgctgctgcaggaatggcagacacactct
ctggagaagcatacagcagttttggtggacagcataaagaagggaatcagagatgctgac
tcagaggctcgtgtggaggccagaaaggcctactgggggctgcggtcacatttccccgtg
gaggcggagtctctgtataactcgttagaatcgtcctatcaaaagacccttcagtcgtgt
ctaaagagctcgggcagcgtggcatcgcttccacagtcggatcgttcctcctccagctcg
caggaaagtctcaatcggcctttgacttcaaaatggtcagctgctccaggcagagttcca
gccagctctaagtcatcaggctcaccaggttccctgcagcgatctcggagcgatgtggat
gtaaacgcagctgccagcgcgaaggccagacacagtggacaggcaggaggagccggccgc
ctcactacagctttacccccaggcacctacgcctcactagatgatgcctctgataaggat
ggccgactacgtactaagcagccgttgtcaactccatcaggaattagcagcagtcaggtg
gactcgagggcccggagccgaacaaagatggtatctcagtcacagcgttccgacgattct
gattgcacgccagcgggttctcggtctggctcgccgggccgtgtgttggccagcacagct
ttgagcacactgagtacaggcgcccagcgggtgagtgctgctccaggctcccagcggcgc
agcagaatcccacgcagtcagggctgcagccgagattcaagccccacccgcctgtccgtg
gcaccgtcgaacgtcagccacatctacaacggagcaaaaggagcgcggggtagtcgtata
ccgcggcctagtgtgagtcagggctgcagtcgtgaggccagtcgagagagcagcagagac
accagccctgtgcgctccttcacgccgcttgcttcacgacactactctcgctctactggt
actcttcatgcctctgatgcctttggggcagcaggttcaggtttgggaatctctcagtcg
agtcgtctctcttcctctgtcagtgccatgagagtgttgaatacagggtcagacgtagag
gaggccctcgctgatgcactgctgttaggagatacgcggagcaagaagaaaccggctcgg
cggcggtacgagacctacggcatgtattctgatgacgatgccaacagcgacgcgtcgagt
gcttgctcggaacgttcgtatagctcgcgcaacggcagtatccccacgtacatgcgtcag
gctgaggacgtggctgaagtgcttaaccgctgtgcctcggccaactggtctgagaggaaa
gaagggctgatgggattacaggctctgttgaagaaccagcgtgctctcagccgggtcgag
ctcaagaggttgtgtgagatttttacccggatgtttgcagacccacacagcaagcgtgag
tccagaggcttcggcacggcagaatccggtatcagttccgcctcctttaaggtgtttagc
atgttcctggagacactggtggacttcataatagttcataaggcagatcttcaggactgg
ctgttcgtgctgcttacgcagctactgaaaaagatgggtgctgacctcctcggctctgtg
caggccaaagtgcagaaagccctcgacgtcacaagggagtcttttcctaatgatctacag
ttcacaattctcatgagattcaccgtagaccagacgcagacacccaacttaaaggtgaag
gtggccattttgaagtacatagagaccctgacgctgcaaatggagccgcaggactttgtg
aactccagcgagaccagacttgcagtctcccgcatcatcacgtggaccacagaacccaag
agctccgatgtcaggaaggcagcccagtctgtgctgattgcgctattccagttgaatacg
ccggaattcaccatgcttcttggtgcactacctaaaactttccaagatggggctaccaaa
ctccttcagaaccacctacgcaacactgggggcgtagcaccagccccagtgggtagcccc
ctgacacgacacacaccgaggtcaccagccaactggtctagtcctctaacatccccgacc
aacacgtcacagaacacgccttcccctagtgcatttgattatgacacggagaatatgaac
tcggaggagatctacagctctctccgtggtgttacccaagccatccagaacttcagtgtg
cggagccaagaggacatgagtgaacctcctcgcaaaagggagggagacggagaagagggc
ggtgctgacactacggatacgggtcggacagcactggacaacaaaacgtctctgctgaac
accatgcccctcctctcctctagtccccgccccagcaaggagtatcagccaggtagttac
tcagattcttccttcggctcctccccctttagtaagagcctgaaagatgcactggaccaa
gacggcgagagccttacagatgatagcagtgtggaccagtccgaggtggtggcggagctg
ctaaaggagctgtccaatcacagcgagcgggtggaggagaggaaggcagcgctctgtgaa
ctcatgcgtctgatcagggaaacgcagttgcatgtctgggatgaacattttaaaactatt
ctcctgctgctgctggaaaccctgggggatggagagcatgtgattcgtgcactggcactg
cgggtgctgaaggagattttgaacaggcagccctggcgctttaagaactatgcagagctc
accattatgaagaccttggaagcacacaaagacccacacaaagaggtggtccgggcagca
gaagaagcagcggccatgctggcaagttctatcagcccggagcagtgcattaaggtgctg
tgtcccatcattcagtctgcagactatcccatcaatctggctgccatcaagatgctcacc
aaagtaattgagcgactgcctaaggaaggtctgctccagatgctcccggagattgtccct
ggacttattcagggttatgataactctgagagcagtgtacggaaagcttgcgtgttctgc
cttgttgccatctatgccatcatcggggaggatctcaaaccttacctcagccaactgtct
ggcagcaagctgaagctgttgaatctgtatataaagcgtgctcagagtggatccagcggc
agtgaccagtcgtcagatgtgggaggtcaaggcctgtag
DBGET
integrated database retrieval system
