Ictalurus punctatus (channel catfish): 108257120
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Entry
108257120 CDS
T04658
Symbol
brd4
Name
(RefSeq) bromodomain-containing protein 4 isoform X1
KO
K11722
bromodomain-containing protein 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ipu01001
]
108257120 (brd4)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108257120 (brd4)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257120 (brd4)
Protein kinases [BR:
ipu01001
]
Serine/threonine kinases: Other
BRD family [OT]
108257120 (brd4)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Brd4/P-TEFb complex
108257120 (brd4)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108257120 (brd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BET
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
108257120
NCBI-ProteinID:
XP_017310062
Ensembl:
ENSIPUG00000006088
UniProt:
A0A2D0PVL7
LinkDB
All DBs
Position
24:complement(18225877..18288435)
Genome browser
AA seq
1564 aa
AA seq
DB search
MDYKMHSKSNDLLDFQTLDALLEKIAHYSAAVKRDPSEECNGIGGALPAEAAPGSRLNEW
CPVAPPPPLPPPPPPASAPVPVLHPTSMGDGLDAAPMSGSSSSSQGQPQPQSQPSHAFNP
PPPEIVDSSRPKRQTNQLQYLSKVVLKTLWKHQFSWPFQAPVDAVKLNLPDYYKIIKNPM
DMGTIKKRLENSYYWNAQECIQDFNTMFTNCYIYNKAGDDIVLMAEALEKLFLQKISEMP
QEENEIAVMTPKGRGRGRRDPGLNIKPPGPGLDSPSTTPQTRGISNHGAGPQTRGPIPGP
PALPPQVALQQALPPRVPPTIPQLGPPFPLGPSDCNPPGTIMTSVPPPTQTALPPMPIQQ
SPAPMLQSVMPKVSPQRLKQRKSQKRKADTTTPTANDQLSESSPAESKSGKTLPRRESVR
PSKQPKKEAPDSQHHLAYSAPAGPNSPKVLEQLRYCAGIVKEMFAKKHTAYAWPFYKPVD
VETLGLHDYHDIIKHPMDLTTIKDKLDNRQYRDAQEFAADVRLMFSNCYKYNPPDHEVVV
MARKLQDVFEMRFAKMPDEPEEVFTPAPAPVLHPAAPVKPQPPIAAPSSSDSSSDSSSES
ESSTDDSEEERAQRLAELKEQVRKKDLKAVHEQLAALSQPQASKPKKKEKDKKEKKKEKH
KKKAIPGLDEILEPPSALPTPKSKNKNNKDPLPKKTKKPSKKEGMKNNRSIPPPGTAPPT
LQPGPGLDPVEESGLAGGPGSAGLVPAEKCKPMSYEEKRQLSLDINKLPGDKLGRVVHII
QSREPSLKNSNPDEIEIDFETLKPSTLRELERYVSSCLRKKKKPPEKTVETMSAKPKGSS
SDSGSSSESSSSDSEDSESGMASKLKKRGHSAKEGKKGHHPVIAPGMVQPQMPLQPQAPV
LQPTAQLKQQQQPQQQQQQHPSPAAYMAPQVTALESSQLLENTFDSLPHFGQPLMHMSHH
TNDSSSPAPPHLNAHTASGPGSPDTHPFLNQHPILQSPALHNALPQQPSRPSNRAAPLPA
KPPQPSTPQQPLQLQPQQPPQPQHHLPPHLLHPHQPIRQRPLSPPTLTPQGLLSSQPPQL
LLEDDEEPMPTMPLNQVLFLQQLQQGRQQQQQQQVPLMQALQGRQSQPQSQPSLLQTVQV
QSQLPVQTQLSVQTQPQAAPVHQPSPQMPQHAPRHMQQSQSQQQQQQQQQQQQQQQQQLA
FSQGPVQTTQTQPAQHKVAMTPSKAQQQIIQQQQQQHPSPRQHKPDPYSTGHLIENPSPL
MMHSPQISQYPPVGHQSPPQNLQPKKEPQRGPPALGPLKEEKQSPSPVMRSESFSPPIRQ
EPHKQPESKTHMPGHGQQRPDMKPLDTSRPVIRSSDHSGPPPTMPDKDKFKQEPKTPVAP
KKVQDVKLKNMGSWASLAQRSTSTPSSAVKSSSDSFEQFRRAAREKEEREKALKAQAEQA
EKDRQRRDQEKHRGRDDEDTMEVPRRPHEEQRRRSEHQQAQAAPPQQQHQAPSQTPTQQP
QTPSAPQPSQAPPQSPASSQSALDQQREMARRREQERRRREAMAATIDMNFQSDLMAIFE
ENLF
NT seq
4695 nt
NT seq
+upstream
nt +downstream
nt
atggattacaagatgcattccaagtccaatgatttgctggattttcagacactggatgcc
cttttggaaaaaattgcacattattcagcagctgtaaaaagagatcccagcgaggagtgc
aatggaatcggcggcgctctccctgcagaggccgcgcccggctcgcggctgaacgagtgg
tgtcccgtggcccctcctcctcctcttcctcctcctccacctcctgcatctgccccggtg
cctgtgctccatccgaccagtatgggtgacggtctggacgccgcaccgatgtcagggagc
agcagcagcagccaggggcaaccccagccccagtctcagccctctcacgcattcaacccc
cctcccccggagatcgtcgattcatcacggccaaagcgccagaccaaccagctgcaatat
ctctccaaggtggtgctcaagacgctgtggaagcaccagttctcatggcccttccaggct
cccgtagatgccgtcaagctaaacctgcctgactattacaagatcattaaaaaccctatg
gacatgggaacaatcaagaagcggctcgagaacagttactactggaacgcccaagaatgt
attcaagacttcaacaccatgtttaccaactgctacatctacaacaaggcaggggatgac
atagtcttaatggccgaggcactggagaaactgttcctccagaagatttcggaaatgccc
caggaggagaacgagatcgccgtcatgactccgaagggccgtggtcggggcaggagggac
ccagggttgaacataaagccccccggacccggcttagattctccgtcgacgacccctcag
actcgtggcatttccaatcacggagcagggccacagactagaggacccataccaggtcct
ccagcgctccctccacaggtggctctgcagcaagctcttcctcctcgagttccccctacg
atcccccagctgggtcctccctttccgctcggcccttcagactgcaatcctccgggcacc
atcatgacctcggtgcctcccccgacccagactgcccttccacccatgcccattcaacag
agtcctgcaccgatgcttcagagcgtcatgcctaaagtgagtcctcagagattaaagcag
agaaaaagccagaagaggaaagcagacacgacgacccccaccgccaatgaccagctgagc
gagtcctctcccgcggagtccaagtcaggaaagactctccctcggagagagagcgtgcgg
ccgtcgaaacaacccaagaaagaagcgcccgattcccagcaccatctggcctacagcgcg
cccgccggcccaaacagccccaaagtgctggagcagctacgctactgcgccggcatcgtg
aaggagatgttcgctaagaagcacaccgcttacgcgtggcctttctacaagccggttgat
gtggagactctgggactgcatgactaccacgacatcatcaaacaccccatggacctcacc
accatcaaggacaagttggacaacagacagtacagagacgcgcaggagtttgctgcggac
gtgcggttaatgttctccaactgctacaagtacaaccctccagaccacgaggttgtggtg
atggcgcgcaagctgcaggacgtgtttgagatgcgctttgctaagatgccggatgagccc
gaggaggtctttacccctgcgcctgcccccgtgctgcaccctgcggcccctgtgaagcct
cagccgcccatcgccgccccctcgtcctccgacagctccagcgactcctcgtccgagtcg
gaatcctccaccgacgactcggaagaggagagagctcagaggctggctgagctcaaggag
caggtgcggaaaaaagacctcaaggcggtccacgagcagctggcagccctgtctcagccc
caggccagcaaaccaaagaagaaagagaaggacaagaaggaaaagaagaaggagaagcac
aaaaagaaagccatccccggactggacgagatcctcgagcctccttctgctctcccgacc
ccgaagagcaagaataagaacaacaaagatcctctgcccaagaagaccaagaagccaagt
aagaaggaaggcatgaagaacaaccgctccattcctcccccgggcacagcgcctcccacc
ctgcagcctgggcctggcctcgaccccgtggaagagtcaggtctggcagggggaccggga
tccgcgggcttggtacctgccgaaaagtgcaagcccatgtcctacgaggagaagagacag
ctgagcctcgacatcaataagctgcctggggacaagctgggccgtgtggtccacatcatt
caatcccgcgagccttcgctgaaaaactccaacccggacgagatcgagatcgacttcgag
acgctaaaaccttccacgctgcgagagctggagagatacgtttcgtcctgtctccgcaag
aagaagaagcctccagaaaagaccgtggagactatgagcgctaagccgaaaggctcgtct
tcagactcgggcagcagcagcgagtcgagctcgtccgacagcgaggactcggagtcagga
atggcctctaaattgaagaagagaggtcactctgctaaagaggggaagaaaggccaccac
ccggtgatagcgccaggtatggtccagccccagatgcccctccagccccaggctccggtc
ttacagcccacagctcagctaaaacaacagcagcagccacaacagcagcagcagcagcat
ccgtctcctgcagcgtacatggctcctcaggtcacggcgctggagtcgtcgcagctgctc
gagaacacgtttgactctttgccccactttggacagcccctcatgcacatgtcccaccac
accaacgactcgtcctctcctgccccgcctcacctcaacgctcacacagcaagtggcccc
gggtcacctgacacgcacccgttcttaaaccagcaccccatcctccaatccccagcactg
cacaacgctctgcctcagcagccttcacgtcctagcaacagagcagcgccgctccccgcc
aaacccccgcagccctcgactccccagcagcctctgcagctccagccccagcagccccct
caaccccagcaccacctccctcctcacctcctgcacccccatcagcccatccgccagagg
ccgctgtcccctcctacgctcactccgcagggccttctctcctcacagcctcctcagtta
ctgctggaggatgatgaggaacccatgcccaccatgcccctcaaccaggtcctcttcctg
cagcagctgcagcagggtcgacaacagcagcagcagcagcaggtcccactcatgcaggcc
ctccagggccgtcagtcacagccacagagccagccttccctgttgcagacggtgcaggtg
cagtcacagcttcctgtgcagacccaactgtctgtccaaactcaaccccaggctgctcca
gtgcaccagccctcgccgcagatgccccagcatgcacccagacacatgcagcaatcgcag
agccagcagcagcagcagcagcagcaacaacaacagcagcagcagcagcagcagctggct
ttctcacaaggcccagtgcagaccacacagacgcagccggcgcagcacaaagtggccatg
actcccagtaaagcgcagcagcagattattcagcagcagcagcagcagcatccttctcca
cgtcaacacaaacctgatccctatagcacaggacacctgatagagaacccctctcctctc
atgatgcattcccctcagatttctcagtatcctcctgtaggccatcagtctcctccacaa
aacctccagcctaaaaaagagccgcagcgagggccgccggctctcgggcctctgaaggag
gagaagcagtcgccctcgcccgtgatgaggagcgagtccttcagcccgcccatacgccag
gaaccacacaaacagcctgagagcaagacacacatgccgggccacggccagcagaggcca
gacatgaagcctctggacacgtctcgccccgtaatccgctcctcggaccatagcggtcca
ccccccaccatgccggacaaggacaagttcaaacaggagcccaagactcctgtggctcct
aaaaaggtacaggatgtgaaactgaagaacatgggctcatgggccagcctggcgcagagg
tccacgtctacgccgtcctcggcggtgaaatcgagcagcgacagcttcgagcagttccgc
cgagcagcccgggagaaggaggagcgggagaaagcgctgaaggctcaagcagagcaggca
gagaaggaccggcagcgcagagaccaggagaaacatcggggccgtgatgatgaagatacg
atggaggttcctcgaaggccccatgaggagcagcggaggcgctctgagcaccagcaagcc
caggccgctccgccacaacagcagcaccaggccccgtcccaaacgccaacccaacagccc
cagacgccgtccgccccgcagccgtcacaggcaccccctcagtctccagcctccagccag
agcgccctcgaccagcagagagagatggcacgccgccgcgagcaagagaggaggaggaga
gaggcgatggcagctaccatcgacatgaacttccaaagcgatctgatggcgatcttcgag
gagaacttgttctga
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integrated database retrieval system
