Ictalurus punctatus (channel catfish): 108257130
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Entry
108257130 CDS
T04658
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
108257130
Domain-containing proteins not elsewhere classified [BR:
ipu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108257130
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
HipN
Motif
Other DBs
NCBI-GeneID:
108257130
NCBI-ProteinID:
XP_017310087
Ensembl:
ENSIPUG00000003913
UniProt:
A0A2D0PVP2
LinkDB
All DBs
Position
24:complement(16339415..16371920)
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AA seq
955 aa
AA seq
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MFVFQANLSVWGWGGLGILLFLITFGPFAIFYLAFYIFCFLGGGFAVTLLFGKTNSEKHL
EKCEHSYLPPTPTGIAKTLEELKQETKPIKIDRRLTGSNFIDEPLQQVIQFALRDYIQYW
YYTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERL
NEREDPKQREAPEELLDAFFETEVEMERKICRDVVCTSHGDEEGFLRDLCEVLLYLLLPP
GDFHNKNMRYFLREILARGVLLPLINQLSDPDYINQFIIWMIRDSSCNYEAFMNILKLTD
KTAELEAVKDKVLEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCETRIQRLQSGKDVD
AMKLAANFGKLCIIPLDHILVHNIALQFFMDYMQQMGGQADLFFWLTVEGYRVTAQQQLE
VLQSWKKDGRKQTGQTKDLLKAAALGVYEQYLSEKASPRVQVDRACVDRLAEKLNKEDPT
PEIFDDIQRKVYDMMLKDERFYPSFKQHPLYVRMLAELDMLKEPSYRGSDDGDAESFNGS
PTGSINLSLDDLTNATTDESVQLHAFISDTGVCNDHGKTYALYAITVFRKNPDGSEDTWK
TYRRYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLERRKKDLNAYLQLLLNPE
LVKACPMLIGHVHDFLENKAYSKGKGDFARKMDTFVNPLRSSMRNVSNAVKSLPDSLAEG
MTKVTDNVGRMGERLGQDLRQSIFKVPPLIPKSDIDPEHCRVSAQLDDNVDDNIPLRVML
LLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTSPEQVADYVKRF
RDSYWPNGILAETPPCRDKSIRMRTRVAAKTNLLGIMPDELKHIIGAETTRKGILRVFEM
FQHQQLNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIRTYSQKVRTLQKR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttttccaggccaatctgtcagtctggggatgggggggcctgggaatcctgctt
ttcctcatcacgttcggaccctttgccatattttatttggcgttttatatcttctgtttt
cttggcgggggcttcgctgtcacgcttttatttggaaagacaaattccgaaaaacaccta
gagaaatgtgagcactcctacctgccccccaccccaacaggcatagccaagactttagag
gagctgaagcaggagacgaagcccatcaaaatcgaccggcgtctgacgggatccaacttc
atcgatgagcctctgcaacaggtgattcagtttgctctgagggactacatccagtactgg
tattacacgctgagcgaggacgagtccttcctgctggagatcagacagacggtgcagaac
gctctggtgcagttctccacgcggtccaaagaggtggactggcagccttatttcaccacc
agactggtggacgacttcgccactcatctccgtgttttcagaaaggcccaggagaggctg
aacgagagggaggaccccaaacaacgtgaagctccagaggagctgctggatgcgtttttt
gagacggaggtggagatggagaggaagatctgcagagatgtagtgtgcacctcccatgga
gatgaagaagggttcctgcgggatctgtgtgaggtgctgctgtatctcttactacctcct
ggagatttccacaacaagaacatgagatacttcctcagggaaatcttggcgagaggagtt
ctgctgccgttgattaaccaactaagtgatcccgattatatcaatcagttcatcatctgg
atgatccgagactccagctgcaactacgaagccttcatgaacatcctgaagctgactgac
aagacggccgaactggaggctgtcaaagacaaagtactggaggagctccagtacctgcgc
tcgctggataccgcgggagatgatatcaacactataaagaatcaaattaacagtttactg
tttgtgaagaaagtctgcgaaacgagaatacagaggctgcagtcgggaaaggacgtcgat
gctatgaaacttgcagcgaattttgggaagttgtgcatcatcccgctggatcatatcctc
gtgcacaacatagcgctccagttttttatggactacatgcagcagatggggggtcaggcg
gatctgttcttctggctgacggtggagggataccgggtcacagctcagcagcagctcgag
gttttgcagagctggaagaaggacggcaggaagcagaccggccagactaaggacctatta
aaggccgctgcgctcggtgtctacgagcagtacctctcggagaaggcgtctcccagagtg
caggtggatcgggcctgtgtggacagactggctgagaaactcaacaaagaggatccgact
ccggagatttttgatgacatccagagaaaggtgtatgatatgatgttgaaggacgaacgg
ttctacccttcgtttaagcagcaccctctgtacgtgcgcatgctggccgagttggacatg
ctgaaggagccgagctaccggggatcagacgacggagacgcagagtcttttaatggatct
ccaaccggaagcattaatttgtctttggatgacctcacgaacgccaccacagacgagtcg
gtgcagctacatgcttttatttctgatacgggcgtgtgtaatgaccacgggaagacctac
gcactctacgccatcactgtcttccgtaagaatccagacggcagtgaggacacctggaag
acctaccgccgctacagcgacttccacgacttccacatgcgcatcacggagcagtttgag
aatctcagctcgatattaaaacttcctgggaagaaaacgttcaacaacatggacagggac
tttcttgagagaaggaaaaaggacctgaacgcttatctgcagctgcttctgaatccagag
ctagtgaaggcctgccccatgctgataggtcacgtccatgacttcttggaaaacaaggca
tacagcaaaggcaagggcgactttgcacgaaagatggacacctttgtgaaccctctgcgt
agctccatgagaaacgtatccaatgctgtgaagtcacttcctgacagcctcgctgaagga
atgaccaaagtgacggacaacgtggggcgcatgggcgagagactgggccaggacctcaga
cagtccatattcaaggtgccgcccttaattccgaagtcggacatcgaccctgagcactgc
cgagtgtctgcacagctggatgacaatgtcgacgataatatcccactgcgcgtgatgctg
ctgctgatggacgaggtgtttgacctgaaggagaggaatcagtggctccgcaggaacatc
aagaaccttctacagcagctcattagagccacatacggagacaccatcaacaggaaaatc
gtggatcatgtagacttcatgacgtctccagaacaagtagccgactacgtcaagaggttt
agagattcctactggccgaacggaatcctagcagagacgccaccgtgccgagacaagagc
atccgcatgagaaccagagtagcagctaagactaacctcctgggcatcatgccagacgaa
ctcaagcacatcatcggggcggaaaccacgcgcaagggcatcctccgggtctttgaaatg
ttccagcaccagcagctgaaccgccgcctggtctatgtcttcctggaggggtttctcgaa
accatgttccctcagtacaagttccccgagctgttcgtcaagctgcactcacgctcgcca
cgcatccgcacttattcgcagaaagtccgcaccttacagaagaggtga
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