Ictalurus punctatus (channel catfish): 108257150
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Entry
108257150 CDS
T04658
Symbol
rac1b
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1b isoform X1
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04145
Phagosome
ipu04148
Efferocytosis
ipu04310
Wnt signaling pathway
ipu04370
VEGF signaling pathway
ipu04510
Focal adhesion
ipu04520
Adherens junction
ipu04530
Tight junction
ipu04620
Toll-like receptor signaling pathway
ipu04810
Regulation of actin cytoskeleton
ipu05100
Bacterial invasion of epithelial cells
ipu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108257150 (rac1b)
04310 Wnt signaling pathway
108257150 (rac1b)
04370 VEGF signaling pathway
108257150 (rac1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108257150 (rac1b)
04148 Efferocytosis
108257150 (rac1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108257150 (rac1b)
04520 Adherens junction
108257150 (rac1b)
04530 Tight junction
108257150 (rac1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108257150 (rac1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108257150 (rac1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108257150 (rac1b)
05100 Bacterial invasion of epithelial cells
108257150 (rac1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108257150 (rac1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108257150 (rac1b)
04031 GTP-binding proteins [BR:
ipu04031
]
108257150 (rac1b)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
108257150 (rac1b)
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
108257150 (rac1b)
Macropinocytosis
Ras GTPases
108257150 (rac1b)
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
108257150 (rac1b)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108257150 (rac1b)
Exosomal proteins of other body fluids (saliva and urine)
108257150 (rac1b)
Exosomal proteins of colorectal cancer cells
108257150 (rac1b)
Exosomal proteins of bladder cancer cells
108257150 (rac1b)
GTP-binding proteins [BR:
ipu04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
108257150 (rac1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
108257150
NCBI-ProteinID:
XP_017310129
Ensembl:
ENSIPUG00000010564
UniProt:
W5UD13
LinkDB
All DBs
Position
2:23667859..23673502
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCSLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccataaagtgtgtcgtggttggagacggggctgttggtaaaacatgcctgctg
atcagctacaccaccaatgcgttccccggagagtacattcccacagtatttgataattac
tcagcaaatgtaatggtggatggcaaaccagtcaatttgggtttatgggacacagcagga
caggaagactacgacaggctccgccctctctcctaccctcagacagacgtgtttctgatc
tgcttctcccttgtgagtcctgcctcttttgaaaacgttcgtgctaagtggtacccagag
gtgagacatcactgccccaacactccaatcatcctggtgggaaccaagcttgatctgagg
gatgacaaggataccattgagaagctgaaggagaagaagcttactcccatcacctaccct
cagggcctggccatggctaaagagattggagctgtgaaatatctggaatgctcagccctg
acgcagcgcggcctcaagacggtgtttgacgaggcaattcgagctgttctctgccctccc
ccagtgaagaagaggaagagaaaatgttctctgctctag
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integrated database retrieval system
