Ictalurus punctatus (channel catfish): 108257190
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Entry
108257190 CDS
T04658
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257190 (zgc:91944)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
108257190 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
Motif
Other DBs
NCBI-GeneID:
108257190
NCBI-ProteinID:
XP_017310217
Ensembl:
ENSIPUG00000001609
UniProt:
A0A2D0PW22
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Position
24:complement(14554437..14568323)
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AA seq
469 aa
AA seq
DB search
MRQWSLRAVAPRAEPLPTGRVSPQLSDARMECCDVEPRYTIEQIDLLQRLRLSGLTKPQI
LQALESLERLDPEHRSPFCDNHSAPPRAPTSAAPAAPSSSSSSSSSLTSATTQTPVLDAA
LSPSNSYDASSPPLYPPGVQRSFAYDLAEEDWDLEEKVEEYMRRDSNLVKEEIKAFLNNR
RISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGFRWTENQHAQG
PRSRTDTPWSRQRELLMHLLPWYSAQQAQPGATLSMRSLVKEEPDWRVAGCPGDRAAVGG
PFRLRRGSRFTWRKECQSIMESFFIENQYPDEAKREEIANTCNSVIQKPGCKLSEFERVT
ALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNGEEVENQEFGDQVVNQRFP
DQEELAQRKVTEPDGATLPAVEVVPLPSPATQHMDQKMDETKREAADEE
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagtggagtctccgcgctgtggctccgcgcgctgagccgctccccacgggccgc
gtgtccccgcaactctcagatgccaggatggagtgctgtgatgtggagccacgctacacg
atcgagcagattgacctgcttcagcgcctcaggctgtccggcttgaccaaacctcagatc
ctccaggccctggagtctctagagagactggatccagagcaccgctcgcctttctgtgac
aatcactccgccccgcccagggctcctacctctgcagctccggctgcaccttcttcctca
tcttcctcatcttcctctctcacctcagctaccacacagactccagttctagatgctgca
ctgtcccccagcaacagttatgatgcctcgtctccacccctgtacccacctggagttcag
aggtcattcgcttatgacctggcagaagaggattgggatctggaagagaaggtggaggag
tacatgaggagggacagtaacctggtaaaggaggagatcaaggctttcctcaataacagg
aggatctctcaggctattgtcggccaagttacaggtatcagtcaaagctacatctcccag
tggctgctgcagcagggcttggagatgagcgactccaaacgcagggctttttaccgctgg
tatctgctggagcggaacagtccagggttcagatggactgaaaaccagcatgctcagggc
cccaggagcaggactgacaccccctggagtagacagagagaactactgatgcacctgctc
ccttggtactctgcacagcaggcccagccaggtgctactctgtccatgcgctcactggtc
aaagaggaacctgactggagggttgccggttgccccggtgacagggcggctgttggcggg
cctttcagactgaggaggggcagccgtttcacctggaggaaagagtgtcagtcgatcatg
gagagtttctttatagagaatcagtatcctgatgaagccaaacgtgaggagattgccaac
acctgcaactctgtcatccaaaaaccagggtgcaaactttctgagtttgagagagtcact
gctctgaaagtgtacaactggttcgccaatcgcaggaaggagatgaagagacgtgccaac
atagaggctgctattcttgagagccatggcatagaagtgccaagccccagctgtcactct
aatggtgaagaggttgagaaccaggagtttggagatcaggttgtgaatcagcgatttccg
gatcaggaagagcttgctcagagaaaagtgactgagccagatggagccacactgcctgca
gtggaagtagtgcctcttccaagccctgctactcaacacatggatcagaagatggatgaa
acaaaaagggaggctgctgatgaggagtga
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