Ictalurus punctatus (channel catfish): 108257224
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Entry
108257224 CDS
T04658
Name
(RefSeq) PAT complex subunit CCDC47
KO
K24962
PAT complex subunit CCDC47
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108257224
04131 Membrane trafficking [BR:
ipu04131
]
108257224
Chaperones and folding catalysts [BR:
ipu03110
]
Other chaperones and cochaperones
Others
108257224
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
108257224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
108257224
NCBI-ProteinID:
XP_017310295
Ensembl:
ENSIPUG00000012751
UniProt:
A0A2D0PYV6
LinkDB
All DBs
Position
2:36256538..36269563
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AA seq
486 aa
AA seq
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MRRCLLLLPALLLLLALPDTRGRYNDDFDDGEDLAEFDDNDFAEFEDVTEEPAIVAENEP
PTRPVPSSAPEEDEDEDEATVENEDGQDEFEDGDGQDQDMYSIYDNEEFEGHDTTSPSSK
DTLIYREVPAHLQNSWESYYMEILMVAGLLAYIMNYIIGKNKNSRLAQAWFNSHRELLES
NFALVGDDGTSKEPTSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARM
MRPACDQVQVKVTLNDEDMDTFVFAVGNRKAMGRMQKELQDLSEFCGDKPKSGAKYNLPD
SLAILSEMGEVTDGVMDSKMVHYITNHADKIESIHFSDQFSGPKVMQEEGQPLKLPETKK
TLLFTFNVPGMGNTSPKDMDSLLPLMNMVIYSIDKVKKLRLNREGKMKSERNRARVEENF
LKQTHAQRQEAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRREQKKLEKKQMKMKQ
IKVKAM
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctgtctcctgctgctccctgcgctcctcctgctgctggctctgccggacacc
agggggcgctacaacgacgacttcgacgacggcgaggacctggctgagttcgacgacaac
gacttcgccgagtttgaggacgtcacagaggagccggccatcgtggcggagaacgagcct
ccgacaagaccggtgccttcgtccgctccggaggaggacgaggacgaggacgaggccacg
gtggagaacgaagacgggcaagatgagtttgaggacggagatggacaggatcaggacatg
tacagcatttatgacaacgaggagttcgaaggccacgacacgaccagtccatccagcaag
gacacgctcatctaccgagaggtcccagcacatctgcagaacagctgggagagctactac
atggagatcctgatggtggctggcctcctggcttacatcatgaattacatcattggcaag
aacaagaacagcaggctggctcaggcctggtttaactcgcacagggagcttctggagagc
aacttcgccctcgtcggtgatgacgggacgagtaaggagcccaccagcacggggaagctg
aaccaggagaacgagcacatctacaacctgtggtgctcaggacgtgtctgctgcgagggc
atgctcattcagctcaagtttcttaaaagacaggatctgctgaatgtgctggccaggatg
atgagacctgcttgtgatcaagtgcaagtcaaagtaactctgaacgacgaggacatggac
acgtttgtgtttgcagtgggaaaccggaaggccatggggcgcatgcagaaggagctgcag
gacctgagtgagttctgcggggacaagcccaagtcgggggcgaagtacaacctccctgac
tctctggccatcctatcagagatgggcgaggtcacggatggggtgatggacagcaagatg
gtacattacatcaccaaccatgccgacaaaatagagtccatccatttctcggaccaattt
tctggtccaaaagttatgcaagaggagggtcagcctttaaagctccccgagaccaagaaa
acgctgctgtttacatttaacgtgcctggaatgggtaacacttctcccaaagatatggac
agcctgctgccactcatgaacatggtgatctacagcatcgacaaagtcaagaagttacgc
ctcaacagagaggggaagatgaagtcagaacggaaccgcgcccgcgtcgaggagaacttc
ctgaagcagactcacgctcagaggcaggaagctgcgcagacgcgtcgggaggagaagaag
agagcagagaaagagaggatcatgaatgaggaggaccctgagagacagcgccgcctagag
gaggctgctcagcgtcgagagcaaaagaaactggagaagaagcagatgaagatgaagcaa
attaaagtgaaagccatgtaa
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