KEGG   Ictalurus punctatus (channel catfish): 108257224
Entry
108257224         CDS       T04658                                 
Name
(RefSeq) PAT complex subunit CCDC47
  KO
K24962  PAT complex subunit CCDC47
Organism
ipu  Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ipu03110]
    108257224
   04131 Membrane trafficking [BR:ipu04131]
    108257224
Chaperones and folding catalysts [BR:ipu03110]
 Other chaperones and cochaperones
  Others
   108257224
Membrane trafficking [BR:ipu04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Multi-pass translocon (MPT) complex
    108257224
SSDB
Motif
Pfam: CCDC47
Other DBs
NCBI-GeneID: 108257224
NCBI-ProteinID: XP_017310295
Ensembl: ENSIPUG00000012751
UniProt: A0A2D0PYV6
LinkDB
Position
2:36256538..36269563
AA seq 486 aa
MRRCLLLLPALLLLLALPDTRGRYNDDFDDGEDLAEFDDNDFAEFEDVTEEPAIVAENEP
PTRPVPSSAPEEDEDEDEATVENEDGQDEFEDGDGQDQDMYSIYDNEEFEGHDTTSPSSK
DTLIYREVPAHLQNSWESYYMEILMVAGLLAYIMNYIIGKNKNSRLAQAWFNSHRELLES
NFALVGDDGTSKEPTSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARM
MRPACDQVQVKVTLNDEDMDTFVFAVGNRKAMGRMQKELQDLSEFCGDKPKSGAKYNLPD
SLAILSEMGEVTDGVMDSKMVHYITNHADKIESIHFSDQFSGPKVMQEEGQPLKLPETKK
TLLFTFNVPGMGNTSPKDMDSLLPLMNMVIYSIDKVKKLRLNREGKMKSERNRARVEENF
LKQTHAQRQEAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRREQKKLEKKQMKMKQ
IKVKAM
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgaggcgctgtctcctgctgctccctgcgctcctcctgctgctggctctgccggacacc
agggggcgctacaacgacgacttcgacgacggcgaggacctggctgagttcgacgacaac
gacttcgccgagtttgaggacgtcacagaggagccggccatcgtggcggagaacgagcct
ccgacaagaccggtgccttcgtccgctccggaggaggacgaggacgaggacgaggccacg
gtggagaacgaagacgggcaagatgagtttgaggacggagatggacaggatcaggacatg
tacagcatttatgacaacgaggagttcgaaggccacgacacgaccagtccatccagcaag
gacacgctcatctaccgagaggtcccagcacatctgcagaacagctgggagagctactac
atggagatcctgatggtggctggcctcctggcttacatcatgaattacatcattggcaag
aacaagaacagcaggctggctcaggcctggtttaactcgcacagggagcttctggagagc
aacttcgccctcgtcggtgatgacgggacgagtaaggagcccaccagcacggggaagctg
aaccaggagaacgagcacatctacaacctgtggtgctcaggacgtgtctgctgcgagggc
atgctcattcagctcaagtttcttaaaagacaggatctgctgaatgtgctggccaggatg
atgagacctgcttgtgatcaagtgcaagtcaaagtaactctgaacgacgaggacatggac
acgtttgtgtttgcagtgggaaaccggaaggccatggggcgcatgcagaaggagctgcag
gacctgagtgagttctgcggggacaagcccaagtcgggggcgaagtacaacctccctgac
tctctggccatcctatcagagatgggcgaggtcacggatggggtgatggacagcaagatg
gtacattacatcaccaaccatgccgacaaaatagagtccatccatttctcggaccaattt
tctggtccaaaagttatgcaagaggagggtcagcctttaaagctccccgagaccaagaaa
acgctgctgtttacatttaacgtgcctggaatgggtaacacttctcccaaagatatggac
agcctgctgccactcatgaacatggtgatctacagcatcgacaaagtcaagaagttacgc
ctcaacagagaggggaagatgaagtcagaacggaaccgcgcccgcgtcgaggagaacttc
ctgaagcagactcacgctcagaggcaggaagctgcgcagacgcgtcgggaggagaagaag
agagcagagaaagagaggatcatgaatgaggaggaccctgagagacagcgccgcctagag
gaggctgctcagcgtcgagagcaaaagaaactggagaagaagcagatgaagatgaagcaa
attaaagtgaaagccatgtaa

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