Ictalurus punctatus (channel catfish): 108257231
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Entry
108257231 CDS
T04658
Symbol
eif3ba
Name
(RefSeq) eukaryotic translation initiation factor 3, subunit Ba
KO
K03253
translation initiation factor 3 subunit B
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108257231 (eif3ba)
03012 Translation factors [BR:
ipu03012
]
108257231 (eif3ba)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
108257231 (eif3ba)
Translation factors [BR:
ipu03012
]
Eukaryotic type
Initiation factors
eIF-3
108257231 (eif3ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_WDR5
Tricorn_2nd
RRM_1
Beta-prop_WDR19_1st
WD40_Prp19
PD40
Beta-prop_RIG_2nd
RRM_Nup35
Methyltr_RsmF_N
MRX12_C
Motif
Other DBs
NCBI-GeneID:
108257231
NCBI-ProteinID:
XP_017310301
Ensembl:
ENSIPUG00000018347
UniProt:
A0A2D0PXZ5
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All DBs
Position
24:7112532..7125541
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AA seq
681 aa
AA seq
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MRGTEEMEAEVEFDEGEEPSFSDPEDFEDDISDQELLEDVLREQPQEADGIDSVVVVDNV
PQVGPDRLEKLKNVIHKIFSKFGKITNEFYPEADGKTKGYIFLEYSVPSHAHEAVKNADG
YKLDKQHTFRVNLFTDFDKYMTISDEWEAPEKQPFKDFGNLRHWLEDPDCRDQYSVIYDS
GEKTGIFSNDVKEPIEVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFS
HQGVQLIDFSPCERYVVTFSPLMDTKDDPQAIIIWDVLTGQKKRGFHCESSAHWPIFKWS
PDGKFFARMTQDTLSIYETPSMGLLDKKSLKINGIKDFSWSPGDNIIAFWVPEDKDIPAR
VTLMQLPSRNEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGIVTNFEIFRMREK
QVPVDVVEMKEGIIAFAWEPNGSRFAVLHGESPRINASFYHVKSNGKIDLIKMFDKQQAN
SIFWSPQGQFLVLAGLRSMNGALAFVDTSDCTMMNIAEHYMASDVEWDPTGRFVVTSVSW
WSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPSLLSQEQIKAIKKDLKKYSKIFE
QKDRLSQSKASKELVDKRRAMMEDYRKYREAAMKMYQEQRPLRLELRGGVDTDELDSNVE
DWEEETIEFFINEEIIPLGDL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcacggaagaaatggaggctgaagtagagtttgatgaaggcgaggagccctca
ttcagcgaccccgaggactttgaggacgacatcagtgatcaggagctgttggaagatgtc
ctgagagagcaacctcaagaggctgatggcatcgactcggtcgtcgttgtcgacaacgtt
ccccaagtaggacctgatcgtctggagaaactaaagaacgtcatccacaagatcttctcc
aagttcggcaaaatcaccaacgagttctacccagaagcagatggaaagaccaaagggtac
atttttctggagtactctgtcccgagtcacgcgcacgaagctgtgaagaatgccgatggc
tacaagttggataagcagcacaccttccgcgtcaacctgttcactgacttcgacaagtac
atgacgatcagtgatgaatgggaagcgcctgagaagcagcccttcaaagattttggaaat
ctgcgccactggttggaggaccccgactgccgtgatcagtacagcgtgatctacgattct
ggtgagaaaacaggcatcttttccaacgacgtcaaggaacccattgaggttgaggagaga
gcgcgctggacagaaacatacgtgcgctggtctcctaaaggcacctacctggccacgttc
catcagagaggcattgcgctgtggggtggtgagaagttcaaacagattcagcggttcagc
catcagggagtgcagctgatcgacttctccccttgtgagaggtatgtggttacatttagt
cccctgatggacacgaaagatgatccacaagccatcataatctgggacgttctgactggc
cagaagaagagaggtttccactgcgagagctctgcccactggccaatcttcaagtggagt
ccagacgggaagttctttgctagaatgactcaggacaccctcagcatctacgagacaccg
tcgatgggtcttttggacaagaagagtttgaagataaacggaattaaagatttctcctgg
tcccctggtgataacatcattgcgttctgggtccccgaggacaaagatatcccggcgagg
gtgaccctcatgcagcttccgtccaggaacgagatcagagtacgcaatctgtttaacgtg
gtggactgcaaacttcactggcagaagaacggcgactatctttgcgtaaaagtggacagg
actcctaagggaacacaggggattgtcactaattttgagatcttcaggatgagggagaag
caggttcctgtggatgttgtggagatgaaagagggcatcattgcctttgcctgggaaccc
aatgggagtaggtttgcagtgctgcatggcgaatcccccaggatcaacgcatctttttac
cacgtgaagagcaacggcaaaatcgacttgatcaaaatgtttgacaaacagcaggccaac
agcatcttctggagccctcagggtcagttcttggtcttggctggattgaggagcatgaac
ggcgccctggcgttcgtagacacatcagactgcaccatgatgaacatcgctgagcattac
atggcctctgatgtggaatgggacccaactggccgatttgttgtcacctctgtttcttgg
tggagccacaaggtagacaacgcgtactggctgtggacgtttcaggggcgactgctgcag
aaaaacaacaaagaccgtttctgccagctgctgtggcggcctcgtcctccctctctcctc
tcccaggagcagataaaggccatcaagaaagacctgaagaaatactccaagatcttcgag
cagaaagatcgactcagccagtcgaaggcttcaaaggaactggtcgacaagagacgtgca
atgatggaggattaccgcaagtaccgcgaggccgccatgaagatgtatcaggagcagaga
cctctccgcctcgagctcagaggaggtgtggacactgatgaactggacagtaatgtcgaa
gactgggaagaggagaccattgagtttttcatcaatgaagaaatcattccactcggagat
ctgtag
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