Ictalurus punctatus (channel catfish): 108257264
Help
Entry
108257264 CDS
T04658
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108257264
Enzymes [BR:
ipu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108257264
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108257264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf_C2H2_ZNF598
zf-C2H2_13
zf-C2H2_4
zf-C2H2
DUF7809
Motif
Other DBs
NCBI-GeneID:
108257264
NCBI-ProteinID:
XP_017310373
Ensembl:
ENSIPUG00000016692
UniProt:
A0A2D0PV14
LinkDB
All DBs
Position
24:complement(6113868..6125138)
Genome browser
AA seq
914 aa
AA seq
DB search
MQSTMKKEAENVCVLCCQDIDLFAVGKCDHPVCYRCSTKMRVLCEQKYCAVCRVELDKVI
FVRKLQPFAALAHQEFQAEKKYDIYFGDGKIFAQFRKILLCECPQCPEPKVFSKFEELEQ
HMRKQHELFCCKLCAKHLKIFSYERKWYNRKELARHRTQGDPDDTSHRGHPLCKFCDDRY
LDNDELLKHLRRDHYFCHFCDADGAQEYYSDYRYLSDHFRESHFLCEEGRCSTEQFTHAF
RTEIDYKAHKTAAHSKNRAEARQNRQIDIQFNYAPRQQRRNDGLVGADDYEEVDRFNRQG
RSGRGRPQGLHQNVRSWRYNREEEDKDLAAAIQASQAARRQAERGQVHERGGQKPRKEET
MAGDELRGNRGTVKPPSDIQGRSAKNNVPLKGEDFPVLGAGATPPPPPPVHSMVKPTPVS
LKEDDFPSLVHSGTMGPAPMTPAYTAQARKPSSFQEEDFPALVSKIRPHKPQENTTSAWS
QVGSKSGVLNNKPVVLPTKAHTHSAPVFSSSDPPPSSTVPQAQVSRRKKKLTSSQSAKAT
SKVKSPVSSDDEDPQTGKMVQEVRAVPTMLDISSLLTVKTGSSQPNNKNGKKKRQPSATP
YGTAADNMELVTTAAHKENVPKTKPPDGGVPKGTVVPKSNMFINGYKEKPKETKNTILPE
EPPAPKKQPTSEPPAAPEEEDFPALITKKPPPGFKTTFSLKNIQTVLPPPPPPGLGPVVS
KPPPGFTGVPLNSNVAECTVPELNSCRPASSLGTYHMPENFKQRNMDLIQSIQNFLQNDE
SKFNEFKNYSGQFRQGLISAAQYHKSCHELLGENFSRVFNELLVLLPDTHKQQELLTAHA
DFKAMEKQQPGSKGKKNKKKAWQTCTSNNSLDLDCQVCPTCKQVLAPKDFNAHKTLHNGD
DDFPSLQAISKIIS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcaacgatgaagaaggaagccgagaatgtttgtgtgctctgctgccaggacatt
gatcttttcgccgtggggaaatgtgaccacccggtgtgttaccggtgctccactaagatg
agggtcctgtgcgagcagaaatactgcgccgtctgccgagtggagctggacaaggttata
ttcgttcgaaagctacaacccttcgctgctctcgcgcatcaggaattccaggctgagaag
aaatatgacatctacttcggtgacggaaaaatcttcgcccagttcaggaagattttgctg
tgtgaatgtccacaatgtcctgaacccaaagtgttctccaaattcgaggagttggagcag
catatgcggaagcagcatgagctcttttgctgcaaattatgtgctaagcacttgaagata
ttctcctatgagaggaagtggtacaaccgcaaagaactggctcgacatcggacgcaaggg
gacccagacgacacgtctcatcgcggccatccgctttgtaaattctgtgacgaccgatat
ctggataacgacgaactgctgaagcacttaaggcgagaccactacttttgccatttctgt
gacgcagacggagcacaagaatactacagtgactaccgctatctcagtgatcacttcaga
gagagccattttctgtgtgaggaaggtcgctgcagtacagagcagttcacgcatgccttt
cggacagagatcgactacaaagcccacaaaaccgctgcccacagtaagaaccgggccgag
gcacggcaaaaccggcagatagacatacagttcaactacgccccacgccagcagagaagg
aatgatggtctagtaggtgccgacgattatgaggaagtcgatcgcttcaacagacaaggg
cgctcgggaagaggaagaccgcaggggttacaccagaatgtcagaagctggaggtacaat
agagaggaagaggataaggacctggctgcggcgattcaggcctcacaggctgctcgtcga
caggcggagaggggacaagttcatgagagaggtggccaaaaaccacgcaaagaggagacg
atggctggcgacgagttaagaggcaatcgagggacagtcaaacctcctagtgacatacaa
ggtcgatcagcgaagaataatgtcccgctgaagggtgaagacttcccagtattaggagct
ggtgcaacaccaccgccaccgccgcctgttcatagcatggtgaaacccactcctgtctca
ctgaaagaggatgatttccctagcctggtacattctggtacaatgggtccagccccaatg
acaccagcatacacggctcaagctagaaaaccttcttctttccaagaagaggacttccca
gcacttgtctcaaagatcagacctcataaacctcaagagaatacgacatctgcttggtcc
caagtaggaagcaaatctggcgtgctcaataataagcctgtggttctgccgacaaaggca
cacacgcacagtgcccctgtgttttcctctagtgacccaccaccctcctctactgttcct
caggctcaggtgtctcggcgcaagaagaagcttacctcttcacagagcgccaaagctaca
tccaaagtcaaatctccggtctcgtcagatgatgaggacccccaaactggcaaaatggtt
caggaggttcgtgctgtccccaccatgttagacatttcttccctgcttacagtgaagact
ggctcatcgcagcccaataacaaaaacggcaaaaagaagagacagccttcagccacccct
tacgggacggccgcagataacatggaattggttaccactgcggctcacaaagaaaacgta
cccaagaccaagccaccagatggcggggttccaaaaggcaccgtggtccccaaatcaaat
atgttcataaacggatataaggagaaacctaaggaaactaagaacaccatccttcctgaa
gaaccccctgcccctaaaaagcagcccacctctgaaccaccagctgcacctgaagaagag
gatttccctgctcttattactaagaaacctccacctggttttaagaccacattttcattg
aagaacattcagacagtgcttcctcctcctcctcctcctggtctcgggcctgtggtcagc
aagcctcctccaggattcactggtgttccgctcaacagtaacgtagcagaatgcacggtg
ccagagttgaacagttgtagaccagcatcctcacttggaacttaccacatgcctgaaaac
ttcaaacagaggaacatggaccttattcagtcaatacagaacttccttcagaatgatgaa
tccaagttcaatgaattcaaaaactattcaggacagttcagacagggtttaatatctgct
gcccagtaccacaaaagctgccatgagctgctgggggaaaacttcagcagggtcttcaac
gagttgctggttctacttccagacacacacaaacaacaggagcttctcactgcccatgca
gactttaaagcaatggagaaacagcagccaggctccaaaggcaagaagaacaaaaagaaa
gcctggcaaacgtgtacctctaacaacagtctagacttggactgccaagtgtgtcctacc
tgcaagcaggtattggccccaaaagacttcaacgctcataagaccctgcataatggagat
gacgactttccctctctccaggctataagcaagattatcagttaa
DBGET
integrated database retrieval system
