Ictalurus punctatus (channel catfish): 108257312 Help Entry 108257312         CDS       T04658                                  Name (RefSeq) nucleoporin SEH1 isoform X1   KO K14299   nucleoporin SEH1 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03013   Nucleocytoplasmic transport ipu04150   mTOR signaling pathway Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     108257312  09130 Environmental Information Processing   09132 Signal transduction    04150 mTOR signaling pathway     108257312  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ipu03019]     108257312    04131 Membrane trafficking [BR:ipu04131]     108257312 Messenger RNA biogenesis [BR:ipu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      108257312 Membrane trafficking [BR:ipu04131]  Autophagy   Other autophagy associated proteins    SEACAT/GATOR2 complex     108257312 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_THOC3 WD40 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT122_1st Motif Other DBs NCBI-GeneID:  108257312 NCBI-ProteinID:  XP_053531239 Ensembl:  ENSIPUG00000010552 UniProt:  A0A9F7TC21 LinkDB All DBs Position 24:complement(20863791..20871688) Genome browser AA seq 410 aa AA seqDB search MFVAKSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSDSGEWLCTASWKTHSGSV WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVK FAPKHMGLVLATCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP MIAVGSDDNNVTYTGKVQIYEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHVLAI ATKDVRIFKLVPLRRESSTSSGTTKFEVQLMAQFDSHNSQVWRVSWNITSTLLASSGDDG CVRLWKANYMDNWKCTGILRGDGSPVNGSSVSTAALNATTASGAQNTGVGAAGAGRYFFP HLAPPRLAHLLPPPSLLEQTCEGEHTHSQQPPQLHRRYAAAVSNQDAERE NT seq 1233 nt NT seq  +upstreamnt  +downstreamnt atgtttgtggcgaaaagcatcgcggcggatcataaagatctcattcatgatgtttcttac gacttccacggccgcaggatggccacttgctccagtgaccaaagcgtcaaggtttgggat aaaagtgacagcggcgagtggctctgcacagcaagctggaagactcacagtggctcggtg tggcgtgtgacgtgggctcacccggagttcggtcaggttttagcgtcctgttcctttgac cgcaccgccgcggtttgggaggagatagtcggagagtcgaacgataaacagcgtggcctc agtcactggattaagaggacgacgctggtggacagcaggacgtcggtgacggatgtgaag ttcgcaccgaagcacatgggtctggtcctggccacgtgctcggctgacggcgtggtccgt atctacgaagctccggacgtgatgaacctgagtcagtggagcctccagcacgagatctcc tgcaaactctcctgctcctgcatctcctggaacccctccagctcacgtgcacactctcct atgatcgcagtcggcagtgacgacaacaacgtgacctacaccggaaaagtgcagatctac gagtacaacgaaaacaccaggaagtacgccaaagcagaaaccctgatgaccgtcacggat ccggtccacgacatcgccttcgccccgaacctcggcaggtccttccacgtcctcgccata gcaaccaaagacgtgcgcattttcaagctggtgcctctgcggagagagagctccaccagc tccggcaccaccaagttcgaagtgcagttgatggctcagttcgacagtcacaactctcag gtgtggcgcgtgagctggaacatcaccagcacgctgctcgcctcgtcaggggacgacggc tgcgtccgactctggaaagctaactacatggataactggaagtgcacagggatcctacgg ggagatggaagcccggtgaacggctcctcggtctcgaccgccgctctgaacgccaccacg gcttcaggagctcagaacacgggcgtgggagctgccggagcgggcaggtattttttcccc cacctggccccacccagactggcgcacctcctcccccctccctcgctcctcgagcagacg tgtgaaggagaacacacacactctcagcagccgcctcagctacaccgccgatacgcagcc gctgtgtccaatcaggacgctgagcgcgagtga

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