Ictalurus punctatus (channel catfish): 108257321
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Entry
108257321 CDS
T04658
Name
(RefSeq) oxysterol-binding protein-related protein 6 isoform X1
KO
K20463
oxysterol-binding protein-related protein 3/6/7
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
108257321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108257321
Membrane trafficking [BR:
ipu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Oxysterol-binding proteins
108257321
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Oxysterol_BP
PH_8
PH
Mcp5_PH
Motif
Other DBs
NCBI-GeneID:
108257321
NCBI-ProteinID:
XP_017310464
Ensembl:
ENSIPUG00000011895
UniProt:
A0A2D0PWP7
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All DBs
Position
24:complement(21293982..21311725)
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AA seq
894 aa
AA seq
DB search
MEHHSNHAAVEKSPRSVFKPSHSRSNSTGSSRQQSRDWEVMTDIPSSVIDPEKYSIPGIC
EGFLMKKRKYPLQGWHKRYFFLEKGILRYSKSQQDMMRGKNHAALDVSLAVMSVNKKSKR
IDLDSGDNLIHLKAKSQDIFYIWMTKLTAHRIYKKNEAMSIHHGVLQALSAGTGSTLPTV
ATLAQRNRAMMDTLPQFQTSASVFQPSTLSSPSLASSRVNSKVSAWLQQTQRANACQQEL
ARCQLDLAELGRLIQMLHCLEGDLPITNKDLEKRISMQNLTLEKPKKKVGKVWGHNRTMS
HGMLPANNHISALSSSSGLGSSLQSIPDFVYSQLSTPGCSSPEGKKLQQNIYTVSQRVHT
SLKSVHEGLTLEHERLAQVWTGPDLRQSTSDQLASLCTTLSELELQSRHTKVHSLSLSSD
SSEESFCTVRQDQSCETRSRLSVAESMAEYFDANEVLMSESLSENEASDESGLSDITTSN
SEPEEGQAVVNMKYRTSVSDAPDVPSSVPKETGRRTVLPARCTDNSHIGILSILYNNIGK
DLSRVSMPVALNEPLNFLQRVSEELEYSELLDIASRTDDPYQRMVYVAVFSISGYAWASW
RNRYKPFNPVLGETYESIREERGFRYVAEQVSHHPPVSACHAESQNFTFWQDQRWKNKFW
GKSVEIVSTGLVNVTLPRYGDHYEWNKAVTCIHNVFSQQRWLEHYGDVVIRNLKSDVCSC
KLTFVKSRYGSGENKNEVQGVVLDQAGNVVHRFGGSWHEGIFCDTLPNPQCLWKPNPQPE
DYFEYYGFSRYARELNELTPELKDVLPPTDTRFRPDQRLLEEGKVAESDKLKDEVEEKQR
DRRKELSKRGEEHIPRFFRKTVDDSGREVWVSNGTYWKIRENPGFANTDNLELW
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcacagtaatcatgctgcggtggagaaatctccgcgctcggtgtttaaaccc
agtcactctcgcagcaacagcaccgggtcctctcgacagcagtccagagactgggaggtg
atgaccgatatcccgtccagcgtgatcgatccggagaagtacagcatcccggggatctgt
gagggattcctgatgaagaagaggaagtatccactgcagggttggcacaagagatacttc
tttctggagaaggggatcctcagatactccaaatctcagcaggatatgatgagagggaaa
aaccacgccgctctggacgtcagcctcgccgtcatgtccgtcaacaaaaagtccaaacga
atcgacctggactcaggagataacctgattcacttaaaggctaaaagtcaggacatcttc
tacatctggatgaccaaactgactgcgcaccgcatctataagaagaacgaggcgatgagc
atccatcacggcgtcctgcaggcgctctcggcaggaaccggcagcacgttgcccaccgtg
gccacgttagctcagaggaacagagccatgatggacacgcttcctcagttccagacgtcg
gcctccgtgttccagccctccacgctgagttctccgtctctcgcctcgtcacgcgtcaac
agtaaagtctccgcctggctccagcaaacgcagcgagccaacgcctgccagcaagagctg
gctcgctgtcagctggacctggctgaactcgggcgtctgatccagatgttgcactgcctg
gagggagatctgcccatcactaacaaggacctggagaagaggatcagcatgcagaatctg
actttggagaagccgaaaaagaaagtggggaaagtctggggacacaatcgcacgatgtca
catggcatgcttcctgccaataatcacatcagcgcgttgtcctcgtcctctggtctcggt
tcgtctcttcagtccatcccggatttcgtttactctcagctgtccactccgggctgcagt
tcacccgagggaaagaaactccagcagaacatttacactgtgtctcagagagtccacacg
tctctgaagtccgtccacgaggggctgacgttggagcatgagcgtctcgcgcaggtgtgg
accgggccggacctgcgtcagtccacctccgaccagctcgcctcactgtgcaccacgctg
tccgagctcgagctacagtctcgtcacacgaaagtccactcactgtctctgtcctccgat
tcatctgaggagtcgttctgcaccgtgcgacaggatcagagctgtgagacgcgcagcagg
ctgtccgtcgcagagtccatggccgagtatttcgacgcgaacgaggtcctcatgtccgag
agcctgtcggagaacgaggcttctgacgagtcgggactgagcgacatcaccacgagcaac
tctgagcctgaggagggacaagcagtggtgaacatgaagtacaggacgagtgtgtcggac
gctccagacgttccctccagcgtgccgaaggagacgggccggcgcacggtcctgcctgca
cgctgcactgataacagccacatcggcatcctctccatcctgtacaacaacatcgggaag
gatctgtctcgcgtctccatgcccgtcgctctgaacgagccgctcaacttcctgcagcgc
gtcagtgaggagctcgagtactcggagctgctggacatcgccagccgcacagacgacccc
tatcagaggatggtttacgtggccgtgttctccatctccggttacgcctgggcctcctgg
aggaatcgctataagccctttaacccggtgttgggagagacctacgagagcatcagagag
gaacgcggcttccgctacgtcgccgagcaggtgagtcatcaccctccggtttctgcgtgc
cacgccgagtcacagaacttcacattctggcaagatcagaggtggaagaataagttctgg
ggaaagtctgtggagatcgtgtcgacgggcctggtgaacgtcacgctgccccgatacgga
gatcattacgagtggaataaagcagtgacctgcatccacaatgtgttcagtcagcagcgc
tggctcgagcactacggcgacgtcgtgatccgaaacctgaagagtgacgtctgctcctgc
aaactgaccttcgttaagtctcgctacggctctggagaaaataaaaatgaggtccagggc
gtggttctggatcaggcggggaatgtggtgcatcggttcggcggatcgtggcatgaaggc
atcttctgcgacactctacccaacccacaatgcctctggaagcccaatcctcagcctgaa
gattattttgagtattacgggttctctcgttacgccagagaacttaacgagctcacgcct
gaactgaaggatgtcctgcctcctacagacacacggttccgcccggaccagagacttctt
gaggagggtaaagtggctgagtcggataagctaaaggatgaggtggaggagaaacagagg
gaccggaggaaagaactgtctaagagaggagaggaacacatccctcgtttcttcaggaaa
acggtggacgactccggccgagaggtttgggtctctaacggaacgtactggaagatcagg
gagaatcctggatttgcaaacacggataatctggaattgtggtga
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