Ictalurus punctatus (channel catfish): 108257349
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Entry
108257349 CDS
T04658
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108257349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108257349
Membrane trafficking [BR:
ipu04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
108257349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
nSTAND3
AAA_14
AAA_22
RNA_helicase
ABC_tran
AAA_28
TIP49
AAA_18
AAA_33
AAA_5
RuvB_N
IstB_IS21
Bac_DnaA
AAA_24
NACHT
DUF815
AAA_7
AAA_29
AAA_23
APS_kinase
Parvo_NS1
ORC-CDC6-like
KTI12
Motif
Other DBs
NCBI-GeneID:
108257349
NCBI-ProteinID:
XP_017310524
Ensembl:
ENSIPUG00000022652
UniProt:
A0A2D0PWV9
LinkDB
All DBs
Position
24:complement(13132987..13147393)
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AA seq
1260 aa
AA seq
DB search
MLGSYGIQPVTLVFNNSKNCFLHLSPNLISLLCLRESQVLELSWVDGDKALFLSWIRGGK
ILSSGQEDRVELSRQLGEKLGLPEGTQGFLRPCVQVQSVQQVFVEPLSSDDWEILELHCL
ALEQQLLDQIRVVFRDAVFPVWVDQHTVIYIKIVSFSPSVSYGRLEQFTELVVSPKLRPG
GKQLPHVPPDTEPKNQLLQRQQNAELTSSSITSSTGTDSLPESITNQPDCSQSHRGGMAD
LRSLLRYVFTGKYEHAKVIPEVPTIPAVFQDRVLRVCGAPPAAISHLGSSHGDVHVFPWH
QSDCLSTGQPVLTYGRLSKIHSPKEVREQAKQVMEKKKSSGSQTDTDMQEHADESVVVRM
ICHNVEKLQLDQRSCKMGEIYSGKIWIPRSLRGRLSIDKHSAVKVLPLSCTPKVALAVSL
QPLHPLAESEREEDIQSAFLSWLHALSHQPLACLTARTDLIVLQCTEGKSEFILTVLKPE
AEPKQVDEIFLLSTGALYKADIQIVKEPHVSNHTPPHTADKSPCDGFPSLSSLGGVEDIS
ICAFEHISLSLMGGPLSRELVSTGCGLRSGALLITGAKGSGKTSLAKALCMKAVEELDAH
IEVLDSKKLKGKRADTVRQRLDEVFEQAVWRQPSVVLLDDLDHMTGAATTPEQEQSGEAV
LHHHIAQSLKDLVDEVVGRSSLVTLLVTAQNERSLHPVLTEIQGSHFFQSFCKIEPPNQM
QRVDILRSQMNCKNVVREDCSGVLDLDDAAMKTEGYLPRDLNLLLDRAIHASVVHNRVSG
NAQGVCLSSADLNNALQGFTPPSLWGVQLQMPSVVGMEQVGGLHHARQLLMDTILLPAKY
PLLFSSLPIRHRSGVLLYGAPGTGKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAV
RDVFQRAQAAKPCILFFDEFDSLAPRRGHDSTGVTDRVVNQLLTQLDGVEGLQGVYVLAA
TSRPDLIDPALLRPGRLDKTLYCPPPDREARLEILKALTLAVPLAADVDLEQLAVATELY
TGADLKGLLYNAQLEAIHSSLGPTVLADLGSGSDSEVSVSSLIFLNHSSGSDDSAGETEA
GMETSAVALEHSEIPTEDLNHNIWRLYFGSSFELELGHHSPSELNSQCMSVPNSTTHELT
GASVRDVTFLRGPALMSSVQQGFQELNLEQSEHLRADLNTIKSSYHRSPEDTSLGQTGPI
KPVVLICQSHLTSALANTRASISRQDWRRYTDLYESFGALREAKSQNAVLFTPGQRVTLA
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgttaggcagttatgggattcagccagttacactggtgtttaacaactctaaaaactgc
tttcttcacctgtcacccaacttaatctctctgctctgtctccgggagagtcaggtgttg
gagttgtcttgggttgatggtgataaagccctgttcttaagctggatcagaggcgggaag
atattatcctcagggcaggaggacagggttgagctcagcagacagctgggagagaagctc
gggttacctgaaggaacacagggcttcttgaggccatgtgtgcaggtgcagtcagtgcag
caggtgtttgtggagcctctctcctcagatgactgggaaatcctggagcttcactgcttg
gctcttgaacagcaacttttagaccagatccgagtggtcttcagggacgcagtgttccct
gtgtgggtggaccaacacactgtcatctacatcaagatagtctccttctctccgtctgtc
tcatacggccgattggagcagttcaccgagctggttgtctcccccaaacttcgacctgga
ggcaagcaacttcctcatgttcccccagatactgaaccaaagaaccaacttctgcaaagg
cagcagaatgctgagctcacatcctcatccattacctcgtccactggaaccgactctcta
cccgagtccattacaaatcaaccagattgcagtcagagtcatcggggtggaatggctgat
ctgaggagtctgttaagatacgtgttcacaggaaaatatgagcatgcgaaggtgattcct
gaagttcctactattcctgctgtcttccaggatcgtgtgcttcgggtgtgtggagcccca
cccgcagcgatcagtcatcttggctcaagtcatggagatgttcatgtattcccatggcac
cagtcagactgtttgagtacaggacagcctgtattaacctatggtagactttcaaagatt
cactctcctaaagaagtgagggagcaagccaagcaagtgatggagaagaaaaagagcagt
ggctctcagacagatacagatatgcaggaacacgcagacgagtcggtggtggttaggatg
atttgccacaatgtagagaagctgcaactggatcaaagatcgtgtaaaatgggagaaatt
tatagtgggaagatttggatcccacgcagtttacgaggcaggttgagcatcgacaaacac
tctgctgtgaaagtccttcctttaagctgtacccctaaagtagcactagctgtttcgctc
cagcccttacatccactggctgagagtgagagagaggaagatattcagtctgctttcctc
agctggcttcatgctctgagccatcagcctttagcatgcctcacagcacggaccgacctc
atcgtcctgcaatgcactgaaggaaagtctgagttcatcttgactgtactaaaacctgaa
gctgagccaaagcaagtggatgagatctttctcttatccactggtgccctatacaaagca
gacatacagattgtcaaggagcctcatgtgtcgaaccacacaccaccacacactgcagac
aagtcaccttgtgatggctttccttccctcagctctcttggcggtgtggaggacatcagt
atatgtgcttttgagcacatctctctcagtctgatgggaggtccactctcacgtgagcta
gtatccactggctgtggtctccgcagtggagctctgctcatcacgggagccaagggcagt
ggtaagacttctctagccaaggctctctgcatgaaagctgtggaagagctggatgcccac
atcgaggtactggactccaagaaacttaaaggtaaacgagcagacacggtgaggcagaga
ctggacgaggtttttgagcaagcagtgtggagacagccgtcagtggtcctgttggatgac
ctagatcacatgactggagcagccaccacacctgagcaggagcagagtggcgaggcagtg
ctgcatcaccacatcgcacagagcctgaaggatttggtggatgaagtggtgggacgctcc
agtttggtgactctgctagtcacggcgcagaatgaacgctctcttcacccagtgctgact
gaaatacagggttcacacttctttcagagcttttgtaagatcgagccacccaaccagatg
cagagagtggacattctgaggtcgcagatgaactgtaaaaacgtcgtacgcgaagactgc
tcaggagttcttgatttggatgacgcagccatgaaaaccgagggctatcttccacgagat
ctgaacctactactggacagagccatccatgccagtgttgtacacaatagagtcagtggc
aatgctcaaggtgtgtgtttgagcagtgcagacttgaataacgctctgcagggtttcaca
cccccttctctgtggggggtgcagctgcagatgcccagcgttgtggggatggagcaggtg
ggcgggcttcatcatgcacgccaacttcttatggacaccatcctactgcctgccaagtac
ccactgctcttctcaagtctgccaattcgccatcgctctggtgtgctgctctatggagcg
cctggtacggggaagaccctactggctggagctgttgccaaggagagtggcatgaacttc
atcagcattaagggaccggagctgctcagcaagtacattggtgctagtgagcaggctgtg
agggacgtgtttcaaagagcacaagcagctaaaccctgtatccttttttttgatgagttt
gactccctggcaccacgcagaggacacgacagcacaggggtcactgaccgagtggttaac
cagctgctcacacagctggatggagtagaggggctgcagggagtgtacgtgctggcagcc
accagtcgtcctgatctgatcgaccctgcgctgctgaggcccgggcggctggacaagacc
ctgtactgccctcctccagaccgggaagccaggctggagatcctaaaggcgctgactctc
gctgtgcctctggctgcagatgtggacttggagcagctcgctgtagccactgagctgtac
acaggagccgacctgaaaggcctgttatacaatgctcagctggaggccattcacagcagt
ctgggacctaccgtgctggctgatttgggctcaggatcagacagcgaagtaagcgtatca
tcgctgatcttcctgaaccacagcagtggctctgatgactctgcaggagagactgaggct
ggcatggagacttctgcagtggcactggagcacagcgagattcccactgaagatttaaac
cacaacatctggcgcctctactttggcagctcatttgaattagagctaggccaccattca
ccttccgagctgaattcacagtgcatgtctgtccccaactccaccacacacgagctgacg
ggcgcatcagtgagagacgtgactttcctccggggcccagcgcttatgtcctctgtgcag
cagggcttccaggaactgaaccttgagcaatctgagcatctgagagccgatctcaacacc
atcaaaagcagctatcacaggagcccagaggacaccagtttgggacagacaggccccatt
aaacctgtggtcctgatatgtcagtctcacctcacgtcagcactggctaacactagagct
tctatcagtagacaggactggaggaggtatactgatctctacgagtcatttggggctttg
agagaagccaagtctcagaatgctgtgctgtttacaccaggtcagcgagtaactctggct
taa
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