Ictalurus punctatus (channel catfish): 108257368
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Entry
108257368 CDS
T04658
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108257368 (cacna1ha)
04020 Calcium signaling pathway
108257368 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108257368 (cacna1ha)
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108257368 (cacna1ha)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108257368
NCBI-ProteinID:
XP_017310560
Ensembl:
ENSIPUG00000016205
UniProt:
A0A2D0PZL9
LinkDB
All DBs
Position
24:5955174..6011065
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AA seq
2205 aa
AA seq
DB search
MVTWFEHVSMLVILLNCVTLGMFQPCEDVTCQSEWCVILQAFDDCIFAFFAVEMVIKMMA
LGIFGSKCYLGDTWNRLDFFIVMAGMLEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMR
ILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDKNAKDLYNLSFMSP
YYMHEDGEESPFICSTIINGMLKCTDVPHYKEGEMECNLNASLGHSLSGPDTRNGCVNWN
QYYSVCQPGELNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFIL
LIIVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYMSNDSTLASYSEPGSCYEEML
RYISHLYRKVKRRAYRIYTSWQSKRRKKVNPNSGALPGGGGSNGHGRQKSGGHWARSVHN
LVQHHQHHHCHLSNGSPSPQAIAESTDVLEMRFVTSGVQLTVSSQSPAGLSPGHQSVHSI
FQGDFHEGPQICTGTTALGRLNGGMNYPTILPSFICSYTGSNVTAKGRIEANNSTADMVD
PFEKLHHLTGEHSHRRLMLQMAGVEPTSLLFEVLRCPYCAQALENIDLDLADSECSQSEG
EVVHEFSHRARFRLGHSHYHKRLEDRSRLMRCWENFRDRMKRIVDSKYFNRGIMIAILIN
TLSMGIEYHEQPDELTDILEISNIVFTSMFVLEMIFKLMAFGLFGYIKNPYNIFDGIIVV
ISVWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFI
FTFSILGMHLFGCKFSLKLENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAS
TSPLAALYFVALMSFGNYVLFNLLVAILVEGFQAEGDATKSDADEEKRSVNFEEEEKMGE
LRATELKMYSLMMSANGHVDSRGNLPPPIIMRTAATPMPTPKSSLGTDSIFSLEESRRGS
GISIDPIVYDQRSLASPRKSPCHPCSSSSNWGSRRSSWNGLSRAPSLKRKDTSGERESLL
SGEGRGSFEDEEPEGIMLGNAGSASGGSLHHPSSLDFAELPTLPSPCLSGEYHDCNGRAL
HLSTELPSELSREDSTTEEDLDDSFCFRLKRVLDVYKPKWCKSHEDWSLYIFSPRNRFRM
FCQRIISHKLFDHVVLVFIFLNCITIALERPHIQSNSPERVFLSISNYVFTVIFVAEMTV
KVVALGFYSGKDSYLQSTWNVLDGVLVSVSLIDILEFLASTGGNKIFGILRVLRLLRTLR
PLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGLDTR
NITNKSDCLQANYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDQQPVR
NHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEESRLREEKRQRLMEKRR
RKAQQRPYYADYSPARLYIHTLCTNHYLDLFITFIICINVVTMSIEHYNQPMYLEEALKY
CNYVFTVFFILEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIKMNAALPINP
TIIRIMRVLRIARVLKLLKLATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELF
GKLECTDNNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECTPEDRQCLSY
LPLVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMEMARRHS
NVSAMSSGGPEGRGTYMRPRPHSPEEDERMQRTQENLLSPRKMSVSRMHSLPNDSYMFHP
VRPASAPYPLQEVEPTQAYLELGSVTSIHSQPCEGHSLLQVPGVHPQPHISICMPRIPTP
KSSPLHVVGRPLRRQEAIKNDSIDVQMCDSKGNKEKHIRSTRASITIPVPRISTPSSPLV
SPFLPSYCYMPRVCTLQHPHHQRIIPLRPHSRASSSPSDSMLDSADPADEEVHHINSSAR
LWAGVPAEERCHSLSPCVPSWPLPVKNCTSATNLTDYSTKDKDFKFFSVDARGYLDKPSV
SEDHRRHSIEICSSVDNSAFEPGVGERRHLPSRGQSLHIPRKKKMSPPCISVEPLLETVL
PPSLVSMKKLSESTLLRRRTPSYELALQRDSLDFLEHQLPSQPLIKVERQLSHCGEYLSL
PRFPFHQSDSSSCIVRESNPSAQPPRFDSALEESTDFSTVNRTAQ
NT seq
6618 nt
NT seq
+upstream
nt +downstream
nt
atggtcacctggttcgagcatgtgagcatgctggttatacttctgaactgtgtgaccctg
ggcatgttccagccctgcgaggacgtcacgtgccagtctgagtggtgtgtcatcctccaa
gcatttgatgactgcatctttgcctttttcgctgtggagatggttatcaagatgatggct
ctggggatttttggatctaagtgttaccttggagacacatggaaccgcctggacttcttc
attgtcatggctgggatgttggagtactcactggatggtcacaatgccagcctgtcagcc
atccggactgtgcgtgtgctcaggcctctacgagccatcaacagagtccctagtatgagg
atactggtgactctgctcctagatactctgcctatgttaggcaatgtcctcctgctgtgc
ttttttgtgttctttatattcggcattgttggggtgcagctttgggctggtcttctaagg
aacaggtgtttcctagacaaaaacgcgaaagatctgtacaatctgtccttcatgagtcca
tattacatgcatgaggacggggaggagagcccatttatctgctccactataattaacggc
atgctcaagtgcaccgacgtgccacattacaaggagggtgagatggagtgcaatctaaat
gcatcccttggacactccttgtctggccctgataccaggaacggttgcgtgaactggaac
cagtactacagtgtgtgtcagcccggggagcttaaccctcacaaaggggctgtgaacttt
gacaatattggatatgcttggattgctattttccaggttatcactttggagggatgggtc
gacatcatgtattatgttatggatgcccattccttttacaattttatatattttatattg
cttattatagtgggttctttcttcatgataaatttgtgcctggttgtgatcgcaacccag
ttctcggaaactaagcagcgggagaaccaactgatgcaggagcagcgtgcacgctacatg
tccaatgacagcacactggccagctattcagagcctggcagctgttatgaggagatgctc
aggtacatcagccacctgtaccgcaaagtgaagcgccgtgcataccggatctacaccagt
tggcagagcaagcgcaggaagaaggtcaaccccaatagtggcgccttgccagggggtgga
gggtccaatgggcatggcaggcaaaagagtggtgggcactgggcacgttctgtccacaat
cttgtccagcaccaccagcatcatcactgtcacctcagcaatggcagcccaagccctcag
gccatagctgagagcaccgatgttctggagatgaggtttgtcacgtcaggagttcagctg
acggtgtcctcacagtcacctgctgggctttcaccaggacaccagtcagtgcatagcatc
tttcaaggtgactttcatgaaggcccgcagatttgcacaggcaccacagctctggggaga
cttaatgggggcatgaactatcctaccattttgccatccttcatctgcagctatacaggc
agcaacgtcacagccaaaggtagaatcgaggccaacaacagcacagcagatatggtggat
ccgtttgagaaactacatcatctcacaggagaacacagtcacagacgattgatgctgcag
atggcaggcgtagagccgacttccctgctctttgaggttctcaggtgcccatactgtgca
caggctctggagaacattgacctagacctggctgactcggaatgctcccagtctgaaggc
gaggtggtgcatgagttttcccacagagcaaggtttagactgggacactcgcattaccac
aagaggcttgaggaccgtagccgattgatgcggtgctgggagaacttcagagacaggatg
aaacgcatagtggatagcaagtactttaaccgtgggattatgatcgccatcctcatcaac
acgttgagcatgggaatagagtatcacgagcagcctgatgaactgacagatatcctggag
attagcaatattgttttcaccagcatgtttgtccttgagatgatcttcaagctgatggcc
tttggactcttcggctacatcaaaaacccatataatatctttgatgggataattgttgtt
ataagtgtatgggagattattggacaggctgatgggggtctttccgtgctcaggaccttc
cgtctcttgcgtgtactcaagctggtgcgcttcctaccggctctccggagacagctggtg
gtcctgatgaagacgatggataatgtggccaccttctgcatgctgctcatgctcttcatt
ttcaccttcagtattcttggaatgcatctgtttggctgcaaattcagcctgaagttggag
aatggagacaccatcccagacaggaagaactttgactctttgctgtgggccatcgtcact
gtgtttcagatactaactcaggaggactggaatgtggtcctctataatggaatggcttcc
acctctccattggctgcactttactttgtggccctgatgagctttgggaattatgtccta
tttaaccttctagtagccatcttggtggagggttttcaagcagagggagatgccaccaag
tctgacgcagacgaggagaagagatcagttaattttgaagaagaggagaagatgggagaa
ttacgtgccacagagttaaagatgtactctctgatgatgtctgcaaacgggcatgtggac
tctcgtggtaatttgcctccaccgatcatcatgcgcaccgccgcaactcctatgcccaca
ccaaagagttctcttggcacagactccatcttcagtttagaagaatcaaggcgtggcagt
gggatatccattgatccaattgtttacgatcagagatcattagccagcccacgcaaatca
ccctgccacccatgtagttcaagcagtaactggggcagccgcaggtcaagctggaacggc
ctgagtcgggcaccaagtctaaagaggaaagacacctctggggagagggagtctctgctc
tcaggtgagggcaggggcagctttgaggatgaggagccagaggggatcatgttgggaaat
gcaggaagtgccagtggtggctctctgcaccaccccagttctctggacttcgctgagctg
cccacactccccagcccgtgcctatcaggagagtaccatgactgcaacggcagggcgtta
cacctgtccacagagctgccctcagagctgagtcgcgaggactccaccacagaggaggat
ctagatgatagtttctgttttcgtctgaagagggtgctggatgtgtataaacccaagtgg
tgtaaaagtcatgaggactggtctctctatatattctctccacggaacaggtttcgtatg
ttctgccagaggatcatctcacacaagctgtttgaccatgtggtcttagtctttatcttc
cttaactgcatcactattgctctggagaggccacacattcagtccaatagcccagagcga
gtgttcctcagtatttccaattatgtattcactgtgatatttgttgctgaaatgactgtg
aaggtggtggctcttggcttctattcaggaaaggatagttatctacaaagcacctggaac
gtgttggatggagtgttggtgtctgtttcactcattgacatcctggagttcctggcatcc
accggtgggaacaagatctttggtattctgagagttctacgtctactaaggacgctgagg
cctttaagagtgatcagtcgtgctcctggactgaagctggtggttgaaactttgataacg
tcactgaggcccatcgggaacatagtactgatctgctgcgcgttcttcattgtctttggc
attcttggagttcagctcttcaaaggcaagttttaccactgtgaaggcttggacacaaga
aacatcactaataaatcagattgcctacaagccaactacaaatggattcggaggaagtac
aactttgataatttggggcaggctctcatgtcgctgtttgtgctgtcttgtaaggatggc
tgggtgaatattatgtacgatggcctggatgctgtaggtgtggaccaacagccggtacgt
aaccacaacccctggatgctgctttatttcatctccttcctgctgattgtgagcttcttc
gtgctgaacatgttcgtgggtgtggtggtggagaacttccacaagtgtcggcaggaccag
gaagaagaggagtcgcgcctgcgtgaggagaagaggcagcggttgatggagaaaaggcgc
aggaaagcacagcagcggccctactacgcagattactcaccagcccggctctacatccac
acactgtgcactaaccactacctggacctctttatcaccttcatcatctgcatcaacgtg
gtcaccatgtccatagagcactacaaccagcccatgtatctagaggaagcgttgaagtac
tgcaactatgtcttcactgtcttcttcatcttagaggcgcttctcaaactcgtggctttt
ggcttccgaagattcttcaaagacaggtggaaccaattagatctggccattgtgcttctc
tccatcatgggcatcacgctggaggagatcaagatgaacgctgcccttccaatcaacccc
actatcattcgtatcatgagggttttgagaatagctcgagtgctgaagcttttaaagttg
gctacaggaatgagagcattgctggacactgtgatgcaggctctaccacaggttggaaat
ctgggcttgctgtttatgcttctcttcttcatttatgctgcactcggcgtagagctcttt
gggaaattggaatgcactgacaataacccatgtgaaggactcagtcgacatgccacattc
gagaactttggaatggcctttctaaccctcttcagagtttcaactggtgacaactggaac
ggtataatgaaggacactttaagggagtgcacaccggaagataggcaatgcctgagctac
ctgcccttggtatcccctatatactttgtcacctttgtactgatggcccagtttgtgctg
gtgaacgtggtggtggctgtgttgatgaagcacctggaggagagcaataaggaagccaag
gaagatgccgagatggatgcagagattgagatggagatggaaatggcccggcgtcacagt
aacgtctcagcaatgagctctggtggcccagagggcaggggcacctatatgaggccaagg
ccacattcacctgaagaggatgagcgaatgcagagaactcaggagaatttgttatctcca
cgaaagatgtcagtgtccaggatgcactctttgcctaatgacagttacatgtttcacccg
gtgaggccagccagcgcaccataccctctgcaggaagtggagcccactcaagcatacctc
gaattaggctcagtgacctcgatccactcacagccatgtgaaggtcattccttgctccag
gttcctggtgttcatcctcagccccatattagtatttgcatgcctaggatccccactcca
aagtcatctcccctgcatgttgtaggcaggcctctgcgtagacaggaagcaatcaagaat
gactcgattgatgtgcaaatgtgtgactccaaaggcaacaaggagaaacatattaggagt
acaagagccagcatcaccatcccggtgccgaggatctccacccccagcagccccctggtg
tctcctttcctaccctcttattgctacatgcccagagtctgcaccctccaacaccctcac
caccagagaattattcccctccgaccacacagtcgggccagcagcagccccagcgactct
atgctggactcggccgacccagccgatgaggaggtgcaccatataaacagctcagccagg
ctgtgggcaggagtcccagcagaggagcggtgccactcactgtccccctgtgtcccatcg
tggccattgcctgtgaagaactgtaccagtgccaccaatcttaccgactacagcactaaa
gacaaggactttaagttcttcagcgtggacgccaggggatatttggacaagccctctgtt
tccgaggatcatcggcggcactccattgagatttgctcttctgtggacaacagtgcattt
gagcctggagttggtgaaaggaggcacctgccctcacgaggacaatcactgcacatcccc
agaaagaagaagatgagtcctccttgtatctctgtcgaacccctactagaaacagtgcta
ccaccgtctctcgtgtccatgaaaaaactgtccgagagcacgctactgcggcgaaggacg
ccatcttatgaactggccctacagcgcgactctctagacttcctggagcaccaactcccc
agtcagcctctcatcaaagtggagaggcagctctcacactgtggcgaatatctctctctc
ccacggttcccctttcaccagtcagactccagttcctgcatcgtgcgtgaaagcaaccca
tccgcacagccccctcgtttcgacagtgcactggaggagtccacagatttcagcacagta
aacaggactgctcaatga
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