Ictalurus punctatus (channel catfish): 108257379
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Entry
108257379 CDS
T04658
Name
(RefSeq) transcription factor Sp4 isoform X1
KO
K09194
transcription factor Sp4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257379
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
108257379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
Zap1_zf1
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
108257379
NCBI-ProteinID:
XP_017310589
Ensembl:
ENSIPUG00000004173
UniProt:
A0A2D0PX23
LinkDB
All DBs
Position
24:16659890..16676656
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AA seq
744 aa
AA seq
DB search
MSDQKKEVMATDGGKSGGGEKGNKGKTSSQDAQPSPLALLAATCSKIGGVGGEGQAGVQQ
QIIIDPSQGLVQLQNAPQQLELLPAQFTGNGWQIIAASPATATTTKDNTQAPGVATIATG
TSMVPVDATPGRKVKSAGVNNASVAQQQQQQFQIIQVQNMPNSTGGIQYQVIPHLQTADG
QQIQINPSNPTTLSVQPEQIQLINNQTILATPPRATSASVVSQNVTNQAIPVQIRPSFPL
QLQTIQGTQAPMVTTIPINIGGVTLALPVINNMAAGGGSVQLLQSGDLNVANGSQLITTS
VESTSGTTSLTTSGGGDSISADATALTSVSMTSDACAEGQKDIRSQGGDSDSQSTAQSNG
LQMSEQQTQVQQFHIVSHPVLQQIQIQQTQQQAQQQSQQLVQGSIQLQPAQTLQPLQQNV
QLQAFQNPAQVLIRAPTLTPTGQISWQTVQVQNAGVAQQLTLAPVASSPSGGAFTQIAPL
SIGGTPITLNTAQLASGTGVQTVNIAGLSTAGVQVQGVPLTITGVQGQQQGQEGVKVQPG
PVTVTVGNLTNASLNAVSPDQLGQAQSPSEQEGQPSKRLRRVACSCPNCRDGEGRNNNDP
SKKKQHVCHMEGCGKVYGKTSHLRAHLRWHTGERPFVCNWIFCGKRFTRSDELQRHRRTH
TGEKRFECPECSKRFMRSDHLSKHIKTHQGKKGGAALAILTTEDMEDEVEEALGSPRIVT
VASISQDSDPATPTTSNNLEEEFE
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcaaaagaaagaagtcatggcgacagacggggggaaatcaggtggtggtgaa
aagggcaataaaggaaaaacgtcatcacaggatgcacagccatctcctctcgctctgctt
gcagccacatgcagtaaaataggcggcgtgggcggggaggggcaggccggcgtgcagcag
cagatcatcatcgaccccagccaagggttagtgcagctccagaacgccccacagcagctg
gagcttctcccggctcagttcacaggaaacggttggcagatcatcgccgcttcacctgcc
acagctactacaaccaaggacaacacacaggctcctggcgtggccaccatagcaaccggg
accagcatggtccctgttgacgcgacgcccggacgaaaggttaaatcggccggtgtgaac
aatgcatcggtcgcacaacaacaacagcagcaatttcagatcatccaggtccaaaacatg
cctaattccacaggagggatccagtatcaggtcatcccacacttacagaccgctgacggt
cagcagatccagataaaccccagcaacccaaccactttaagcgtccagcctgagcagatt
caactcattaacaaccaaaccattctggccacacctccaagagccacgtcagccagtgta
gtttcccaaaatgtcacaaatcaggccatccctgtgcagattcgcccatcatttccactc
cagctgcagaccattcagggcacacaagcccccatggtcactacaatacccataaatatt
ggcggcgtcactttggctctgcccgtcatcaacaacatggccgcaggaggaggatcggtg
cagctgctgcagtcaggtgacctgaacgtagcgaatggcagccagttgatcacgaccagc
gtggaatctacatccgggaccaccagcttgaccacatcagggggcggagactccatctct
gcagacgctacagccttaacgtcagtgtccatgacatctgacgcatgtgcagaggggcaa
aaagacatacggtcccaggggggcgattctgacagccagagcacagctcagtccaacggg
ctgcaaatgtccgagcagcagacccaggtgcagcagttccacatcgtcagtcacccggtg
ctgcagcagatccagatccagcaaacgcagcagcaggcacaacagcagtcccagcagctg
gtccagggctccatccagttgcagccggctcagacgctgcagccgctacagcagaacgta
cagctgcaggccttccagaacccggctcaggtcctgatccgggcacctacactcacgcca
actggtcagatcagctggcagacagtgcaggtccagaacgcaggtgtggctcaacagctc
acgctggctccggttgcatccagtccgagcggcggcgcattcacacagatcgctcctctc
tccatcggaggaacgcccatcacgctgaacacggcccagctggcctcggggacgggcgtg
cagacggtcaacattgcaggactgagcactgcaggggtccaggtgcagggcgtcccactc
accatcaccggggtgcagggccagcagcagggtcaggagggtgttaaagtccagcctggt
ccggtgaccgtcaccgtagggaacttgaccaacgccagtctgaacgcagtgagtccggat
cagctgggacaagcacagagtccctcggagcaggagggtcagccaagcaagaggctgcgc
agggtggcttgctcctgccccaactgcagagacggagagggaagaaacaacaacgaccca
tcgaaaaagaagcagcacgtgtgtcacatggaaggctgcgggaaagtctacggcaagacg
tctcacctgcgagctcacctgcgctggcacaccggagagaggcccttcgtctgcaactgg
atcttctgtggaaaacgcttcacgaggagcgacgagcttcagcggcaccgcaggacacac
acgggtgagaagagattcgagtgtccggaatgttccaagagattcatgaggagcgaccac
ctgtcgaagcacatcaaaactcaccagggcaaaaaaggaggtgctgcactggccatcctc
accaccgaggacatggaggacgaggtagaggaggcgctgggctcgccgaggatcgtcacc
gtcgcctccatctcgcaggattctgacccggccacgcccacgacatctaacaacctggag
gaggagttcgagtag
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