Ictalurus punctatus (channel catfish): 108257449
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Entry
108257449 CDS
T04658
Name
(RefSeq) heat shock factor protein 1 isoform X1
KO
K09414
heat shock transcription factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108257449
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
108257449
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GFIT
Motif
Pfam:
Vert_HS_TF
HSF_DNA-bind
ZapB
ADIP
Motif
Other DBs
NCBI-GeneID:
108257449
NCBI-ProteinID:
XP_017310727
Ensembl:
ENSIPUG00000012482
UniProt:
W5ULC9
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Position
24:complement(2496829..2537492)
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AA seq
525 aa
AA seq
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MEFHTTGPGAVLLPGNNVPAFLTKLWTLVDDPETDPLICWSPNGNSFHVFDQGRFSKEVL
PKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKPEKDDTEFQHPYFLRGQEHLLENIKR
KVTTVSNIKHEDLKLSPEDVSKVISDVQHMKGKQELMDTKISTLKHENEALWREVAMLRQ
KHAQQQKVVNKLIQFLVTLARSNRVLGVKRKMPLMLNDSSTAHSIPKYSRQYSLEPSPNL
ASPGTTFSGSGIFSTNAPVKSGPIISDITDLAQSSPASAEEWMEDRTSPLVHVKEEPLSP
TYSSEVEEVCPVEVEVGAGSTLPADTPLSPTTFINSILQESEPSPAPPPPEKCLSVARLD
NSSQTSEVPHPFPSLSSSSSHLRSHPGSELNEHLDSIDSGLENLQAIFNVQSINFDSSPL
FDIFSSNTGADFDLDSLATIQELLSEPVRDTECSDNIKPGKQLVQYTAQPVVVTDPMSTE
NTGEDLPSLLELDGDSYFSPDPADDPTISLLTTDFQTTMPGDPKL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcacaccaccggccccggtgcagtgctgctgcccgggaacaacgtcccggct
ttcctcactaaactgtggacgctggtcgatgatccagagaccgatcccttaatctgctgg
agcccaaacggcaacagcttccatgtgtttgaccagggcaggttctccaaagaagtgctt
cctaaatacttcaagcacaacaacatggccagctttgttcgacagctcaatatgtatggt
ttccggaaagtggtccacattgagcagggaggtttggtgaagcccgagaaagacgatacc
gagttccagcatccctactttctccgtggacaggagcacttgctggagaacattaagagg
aaggtgaccacggtgtccaatattaagcacgaggacctgaagctgagtccagaggacgtg
agcaaagttatctcagacgtgcagcacatgaagggaaagcaggagttgatggacaccaaa
atcagcaccctgaaacatgagaacgaagctttgtggagagaggtggccatgctgaggcag
aaacatgcccagcagcagaaagttgtaaataagctcatccagttcctcgtcacattggca
cggtccaacagagttctcggagtgaagagaaagatgcctctgatgttgaatgacagcagc
acagcacactccattcctaaatacagcaggcagtactctctggagccttcacccaatctt
gcttcccctggaacaactttctcaggatcaggcatcttctccactaatgcaccggtcaag
tctggcccgatcatttccgacatcacagatctggcccagtctagccccgctagtgcagag
gagtggatggaggataggaccagcccgttggtgcatgtaaaggaagagccgttaagcccc
acctacagttctgaggtagaagaagtgtgtcctgtggaggtggaggtcggtgcagggtcc
actttacctgcagacacacccctttcccccaccacctttattaactccattctgcaggag
agtgaaccatcacctgccccacctccacccgagaaatgcttaagcgtggcacgtttggac
aattcctcccagacgtctgaggtgccccacccttttcccagcctctcctcttcgtcttct
cacctcagatcacatccagggagtgagctgaacgagcacctggacagcatcgacagcggc
ttggaaaacctgcaggcgatcttcaacgtgcagtccatcaactttgattcctcgccactc
tttgatatcttcagttcaaacaccggcgctgacttcgacttggacagtttggcaactatt
caggagttgctgtcagaacctgtgagagacaccgagtgtagtgacaacattaaaccagga
aagcagttggttcagtacacagctcagccagtggtggtgaccgaccccatgagcaccgag
aacacgggcgaggatctgcccagtctgctcgagctggacggagactcttattttagccca
gaccctgctgatgatcctaccatctcgctcctgaccactgacttccaaactacaatgcct
ggagatcccaagctatag
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